RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ZNF81P51508 661 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 HIST1H3AP68431 136 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 CCL8P80075 99 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 ECH1Q13011 328 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 GINS1Q14691 196 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 HIST2H3PS2Q5TEC6 136 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 SHQ1Q6PI26 577 aaKnown RBP11.44□□□□□ -0.58
CCL28-202ENST00000489442 HIST2H3AQ71DI3 136 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 OR5L1Q8NGL2 311 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 OR6K6Q8NGW6 343 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 RDH5Q92781 318 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 NRBF2Q96F24 287 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 PLEKHA8Q96JA3 519 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 DDOQ99489 341 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 COQ7Q99807 217 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 ATF6BQ99941 703 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 RBM4Q9BWF3 364 aaKnown RBP11.44□□□□□ -0.58
CCL28-202ENST00000489442 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 CMC2Q9NRP2 79 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 CYB5R1Q9UHQ9 305 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 STARD10Q9Y365 291 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 AP4S1Q9Y587 144 aa11.44□□□□□ -0.58
CCL28-202ENST00000489442 VWC2LB2RUY7 222 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 F5H5K5 113 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 EBAG9O00559 213 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 SPRY3O43610 288 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 HMGN1P05114 100 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 SPI1P17947 270 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 GGT2P36268 569 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 MAGEB1P43366 347 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 BLVRAP53004 296 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 SLC25A1P53007 311 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 TSTQ16762 297 aaKnown RBP11.43□□□□□ -0.58
CCL28-202ENST00000489442 TMEM249Q2WGJ8 235 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 ZMAT1Q5H9K5 638 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
CCL28-202ENST00000489442 CFAP77Q6ZQR2 320 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 OR5K1Q8NHB7 308 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 DNAJC9Q8WXX5 260 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 APOBEC3DQ96AK3 386 aaPredicted RBP11.43□□□□□ -0.58
CCL28-202ENST00000489442 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
CCL28-202ENST00000489442 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
CCL28-202ENST00000489442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCL28-202ENST00000489442 MALRD1Q5VYJ5 2156 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 FAM183AA6NL82 134 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 G3V2T6 193 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 J3QW42 95 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 CD5LO43866 347 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 SPARCP09486 303 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 CLUP10909 449 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 FCGR1AP12314 374 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ZNF23P17027 643 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 COL8A2P25067 703 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 GIFP27352 417 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 RPS27P42677 84 aaKnown RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 ENTPD1P49961 510 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 TPTEP56180 551 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 CCNIQ14094 377 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 TAF13Q15543 124 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ATP6AP1Q15904 470 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ACSM5Q6NUN0 579 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 HIPK1Q86Z02 1210 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ZNF511Q8NB15 262 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ZNRF4Q8WWF5 429 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 PTP4A1Q93096 173 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 SPTSSAQ969W0 71 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 UTP4Q969X6 686 aaKnown RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 CMBLQ96DG6 245 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 NMNAT2Q9BZQ4 307 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 EGLN1Q9GZT9 426 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 OR51V1Q9H2C8 321 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 MED20Q9H944 212 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 SAP30LQ9HAJ7 183 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 NTN4Q9HB63 628 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 PAPOLBQ9NRJ5 636 aaKnown RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 NKIRAS2Q9NYR9 191 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 PTTG3PQ9NZH4 202 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 CGGBP1Q9UFW8 167 aaPredicted RBP11.42□□□□□ -0.58
CCL28-202ENST00000489442 ZDHHC8Q9ULC8 765 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 ABCA2Q9BZC7 2435 aa11.42□□□□□ -0.58
CCL28-202ENST00000489442 A0A096LNT2 108 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 ZNF593O00488 134 aaPredicted RBP11.41□□□□□ -0.58
CCL28-202ENST00000489442 PPIHO43447 177 aaKnown RBP11.41□□□□□ -0.58
CCL28-202ENST00000489442 TLX2O43763 284 aaPredicted RBP11.41□□□□□ -0.58
CCL28-202ENST00000489442 CDC14BO60729 498 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 NCR1O76036 304 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 LCATP04180 440 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 ACHEP22303 614 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
CCL28-202ENST00000489442 SLC6A9P48067 706 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 MMP15P51511 669 aa11.41□□□□□ -0.58
CCL28-202ENST00000489442 MRPS11P82912 194 aaKnown RBP11.41□□□□□ -0.58
CCL28-202ENST00000489442 PSG7Q13046 419 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms