RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 BLVRAP53004 296 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 CDH15P55291 814 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 SLC3A1Q07837 685 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 TRIP10Q15642 601 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 HFEQ30201 348 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 KRTAP27-1Q3LI81 207 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 SLC35F1Q5T1Q4 408 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 SLC18B1Q6NT16 456 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 OR10G2Q8NGC3 310 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 OR2AJ1Q8NGZ0 328 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 SLC7A6OSQ96CW6 309 aaPredicted RBP16.17■□□□□ 0.18
MRPL55-230ENST00000489430 TSSK6Q9BXA6 273 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 BEX2Q9BXY8 128 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 PLA2G12AQ9BZM1 189 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 SHARPINQ9H0F6 387 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 TBC1D23Q9NUY8 699 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 VNN3Q9NY84 501 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 PURGQ9UJV8 347 aaKnown RBP16.17■□□□□ 0.18
MRPL55-230ENST00000489430 STARD10Q9Y365 291 aa16.17■□□□□ 0.18
MRPL55-230ENST00000489430 ZSCAN5BA6NJL1 495 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 B4DSR2 109 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 TPD52L2O43399 206 aaKnown RBP16.16■□□□□ 0.18
MRPL55-230ENST00000489430 PPIHO43447 177 aaKnown RBP16.16■□□□□ 0.18
MRPL55-230ENST00000489430 TIMM8AO60220 97 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-230ENST00000489430 DNAJC8O75937 253 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-230ENST00000489430 HLA-DQA2P01906 255 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 ZNF823P16415 610 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 HNF1AP20823 631 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 PCMT1P22061 227 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 SLC25A1P53007 311 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 CDK5R2Q13319 367 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 MEP1BQ16820 701 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 TMEM255AQ5JRV8 349 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 FBXW12Q6X9E4 464 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 COLCA1Q6ZS62 124 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 USP51Q70EK9 711 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 OR8D4Q8NGM9 314 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 GIPC3Q8TF64 312 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 CANT1Q8WVQ1 401 aa16.16■□□□□ 0.18
MRPL55-230ENST00000489430 RBM4Q9BWF3 364 aaKnown RBP16.16■□□□□ 0.18
MRPL55-230ENST00000489430 CLDN25C9JDP6 229 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 SPRY3O43610 288 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 GPANK1O95872 356 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 IFNGP01579 166 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 TNFSF4P23510 183 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 IGFBP5P24593 272 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 RASSF2P50749 326 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 PPP1R8Q12972 351 aaKnown RBP16.15■□□□□ 0.18
MRPL55-230ENST00000489430 FLOT2Q14254 428 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 TSTQ16762 297 aaKnown RBP16.15■□□□□ 0.18
MRPL55-230ENST00000489430 SLC37A3Q8NCC5 494 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 PROKR2Q8NFJ6 384 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 SLC7A6Q92536 515 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 CMBLQ96DG6 245 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 TIMD4Q96H15 378 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 FEVQ99581 238 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 ATF6BQ99941 703 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 C1QTNF5Q9BXJ0 243 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 NMNAT2Q9BZQ4 307 aa16.15■□□□□ 0.18
MRPL55-230ENST00000489430 MRPL22Q9NWU5 206 aaKnown RBP16.15■□□□□ 0.18
MRPL55-230ENST00000489430 GNGT2O14610 69 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 SURF4O15260 269 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 CDC14BO60729 498 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 IL2RGP31785 369 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 DVL1P1P54792 670 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-230ENST00000489430 BNIP1Q12981 228 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 OTPQ5XKR4 325 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 CORO6Q6QEF8 472 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 CFAP77Q6ZQR2 320 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 PAPD5Q8NDF8 572 aaKnown RBP16.14■□□□□ 0.17
MRPL55-230ENST00000489430 CLDND2Q8NHS1 167 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 GTF3AQ92664 365 aaKnown RBP16.14■□□□□ 0.17
MRPL55-230ENST00000489430 RAB1CQ92928 201 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 PITX2Q99697 317 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 SOX7Q9BT81 388 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 POMPQ9Y244 141 aa16.14■□□□□ 0.17
MRPL55-230ENST00000489430 CHD3Q12873 2000 aaKnown RBP16.14■□□□□ 0.17
MRPL55-230ENST00000489430 YLPM1P49750 1951 aaKnown RBP16.13■□□□□ 0.17
MRPL55-230ENST00000489430 TCRBV3S1A0A5B6 114 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 RIIAD1A6NNX1 92 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 ATP5HO75947 161 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 DBHP09172 617 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 ANPEPP15144 967 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 SELEP16581 610 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 ZNF3P17036 446 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 TNFRSF1AP19438 455 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 PCK2Q16822 640 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 RSPO1Q2MKA7 263 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-230ENST00000489430 TEX30Q5JUR7 227 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 FAM120AOSQ5T036 256 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 SLC27A4Q6P1M0 643 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-230ENST00000489430 CYB561A3Q8NBI2 242 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 OR4Q3Q8NH05 313 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 TEX47Q8TBZ9 253 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 NIPSNAP1Q9BPW8 284 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 FN3KQ9H479 309 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 MSL2Q9HCI7 577 aa16.13■□□□□ 0.17
MRPL55-230ENST00000489430 PNRC2Q9NPJ4 139 aaKnown RBP16.13■□□□□ 0.17
MRPL55-230ENST00000489430 CMC2Q9NRP2 79 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms