RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RNF13O43567 381 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 HNRNPCL1O60812 293 aaKnown RBP7.47□□□□□ -1.21
SSBP1-212ENST00000489378 PAHP00439 452 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 ABHD2P08910 425 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 HNRNPCL4P0DMR1 293 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 ALDH3A1P30838 453 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 S100A3P33764 101 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 CCT5P48643 541 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 SRP9P49458 86 aaKnown RBP7.47□□□□□ -1.21
SSBP1-212ENST00000489378 ZNF133P52736 654 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-212ENST00000489378 SLC35A2P78381 396 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 KLRD1Q13241 179 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 CDONQ4KMG0 1287 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 C10orf128Q5T292 105 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 FAM91A1Q658Y4 838 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 OGFOD2Q6N063 350 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 C8orf74Q6P047 294 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 ARL9Q6T311 187 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 BTN2A1Q7KYR7 527 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 IGFN1Q86VF2 1251 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 TRIML2Q8N7C3 387 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 C17orf50Q8WW18 174 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 IFT81Q8WYA0 676 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 NSMAFQ92636 917 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 MAP6Q96JE9 813 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 TSPYL1Q9H0U9 437 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 MEAF6Q9HAF1 191 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 CACYBPQ9HB71 228 aaKnown RBP7.47□□□□□ -1.21
SSBP1-212ENST00000489378 SIRT7Q9NRC8 400 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 TBCCD1Q9NVR7 557 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 IFT52Q9Y366 437 aa7.47□□□□□ -1.21
SSBP1-212ENST00000489378 A0A1B0GVI7 797 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ELOVL7A1L3X0 281 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 E9PBE3 544 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ADAM20O43506 726 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 CHST1O43916 411 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 FAM20BO75063 409 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 TRMUO75648 421 aaKnown RBP7.46□□□□□ -1.21
SSBP1-212ENST00000489378 KRT75O95678 551 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 CH25HO95992 272 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 MT-ATP6P00846 226 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 LAP3P28838 519 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 SAA4P35542 130 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 CDH12P55289 794 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 DSTNP60981 165 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 GUCY1A3Q02108 690 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 FMODQ06828 376 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 OR1Q1Q15612 314 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ZNF74Q16587 644 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 CLEC12AQ5QGZ9 265 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 FAM27BQ5VT28 67 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 SFRP4Q6FHJ7 346 aaPredicted RBP7.46□□□□□ -1.21
SSBP1-212ENST00000489378 OR2T2Q6IF00 324 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 RANBP3LQ86VV4 465 aaPredicted RBP7.46□□□□□ -1.21
SSBP1-212ENST00000489378 WFDC3Q8IUB2 231 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 FGFRL1Q8N441 504 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ANKRD42Q8N9B4 389 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 OR13G1Q8NGZ3 307 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 NPRL2Q8WTW4 380 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 RORBQ92753 470 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 NMD3Q96D46 503 aaKnown RBP7.46□□□□□ -1.21
SSBP1-212ENST00000489378 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ASCL2Q99929 193 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 WFDC6Q9BQY6 131 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 TMEM43Q9BTV4 400 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ZNF702PQ9H963 129 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 C20orf141Q9NUB4 165 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 TIMM10BQ9Y5J6 103 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 KPTNQ9Y664 436 aa7.46□□□□□ -1.21
SSBP1-212ENST00000489378 MEIOCA2RUB1 952 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 COPEO14579 308 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 TPST1O60507 370 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 TPST2O60704 377 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 IRF2P14316 349 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 RAC2P15153 192 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 ZNF26P17031 533 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-212ENST00000489378 EEF1B2P24534 225 aaKnown RBP7.45□□□□□ -1.22
SSBP1-212ENST00000489378 NME5P56597 212 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 METAP1DQ6UB28 335 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-212ENST00000489378 C10orf111Q8N326 155 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 BOLLQ8N9W6 283 aaKnown RBP7.45□□□□□ -1.22
SSBP1-212ENST00000489378 OR8G5Q8NG78 346 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 ASB10Q8WXI3 467 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 PTP4A1Q93096 173 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 SSX3Q99909 188 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 NPFFR1Q9GZQ6 430 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 INPP5EQ9NRR6 644 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 SELENONQ9NZV5 590 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
SSBP1-212ENST00000489378 NKX1-2Q9UD57 310 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-212ENST00000489378 LGALS8O00214 317 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DVL1O14640 695 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 RIPK2O43353 540 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 HLA-DPB1P04440 258 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 CST2P09228 141 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PF4V1P10720 104 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 LYL1P12980 280 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms