RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 XRCC3O43542 346 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 TRAPPC6AO75865 159 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 MSR1P21757 451 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 CDK2P24941 298 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 GDF1P27539 372 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 HSD11B1P28845 292 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 GFRA1P56159 465 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 TAF13Q15543 124 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 OR51D1Q8NGF3 324 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 NKD1Q969G9 470 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 FAM3DQ96BQ1 224 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 FER1L6-AS2Q96M78 137 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 NELFAQ9H3P2 528 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 RCE1Q9Y256 329 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 MED12Q93074 2177 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 RER1O15258 196 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 LRP3O75074 770 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 GLSO94925 669 aaPredicted RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 WDPCPO95876 746 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 ECDO95905 644 aaPredicted RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 ITGA3P26006 1051 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 GDNFP39905 211 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 GRB2P62993 217 aaKnown RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 SGCAQ16586 387 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
NINJ1-204ENST00000489274 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 DPAGT1Q9H3H5 408 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 COPZ2Q9P299 210 aa12.88□□□□□ -0.35
NINJ1-204ENST00000489274 KNTC1P50748 2209 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 LOC390937A0A1W2PQ73 354 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 SYT7O43581 403 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 KRT33AO76009 404 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
NINJ1-204ENST00000489274 CD82P27701 267 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 POU3F4P49335 361 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 SELENOPP49908 381 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 TAS2R20P59543 309 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 HIST1H3AP68431 136 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 C1orf100Q5SVJ3 147 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 NKAIN3Q8N8D7 197 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 ZBTB8BQ8NAP8 495 aaPredicted RBP12.87□□□□□ -0.35
NINJ1-204ENST00000489274 PLPP7Q8NBV4 271 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 OR52I2Q8NH67 350 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 NABP1Q96AH0 204 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 SIGLEC12Q96PQ1 595 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 AUNIPQ9H7T9 357 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 ZNF221Q9UK13 617 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 ALG5Q9Y673 324 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
NINJ1-204ENST00000489274 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 ZNF716A6NP11 495 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 ACOT7O00154 380 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 CXCL13O43927 109 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 DOK2O60496 412 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 CTAG2O75638 210 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 F10P00742 488 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 HPNP05981 417 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 HTR2CP28335 458 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 STARP49675 285 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 CLDN15P56746 228 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 AP3S2P59780 193 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 PLA2G7Q13093 441 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 SNTB2Q13425 540 aaKnown RBP12.86□□□□□ -0.35
NINJ1-204ENST00000489274 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
NINJ1-204ENST00000489274 OR1C1Q15619 314 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
NINJ1-204ENST00000489274 ABLIM2Q6H8Q1 611 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 LUZP2Q86TE4 346 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 GJC3Q8NFK1 279 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 OR10D3Q8NH80 312 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 FGGYQ96C11 551 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 A0A1B0GVI7 797 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 LMX1BO60663 402 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 ZNF84P51523 738 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 CAPZA1P52907 286 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 MRPS34P82930 218 aaKnown RBP12.86□□□□□ -0.35
NINJ1-204ENST00000489274 TBRG1Q3YBR2 411 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 IL22RA1Q8N6P7 574 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
NINJ1-204ENST00000489274 UBASH3BQ8TF42 649 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms