RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 AKAP14Q86UN6 197 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 EGFL6Q8IUX8 553 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 RPS4Y2Q8TD47 263 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SMAP2Q8WU79 429 aaPredicted RBP17.04■□□□□ 0.32
CCM2-216ENST00000488727 PELI1Q96FA3 418 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SLC22A4Q9H015 551 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 PRSS50Q9UI38 385 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 MOKQ9UQ07 419 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 HCFC1P51610 2035 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 A8MXE2 369 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 MSTNO14793 375 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 IGHV3-9P01782 118 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 ACKR1Q16570 336 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 TP53I3Q53FA7 332 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 LINC01590Q5TEZ4 76 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 LEG1Q6P5S2 330 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 ZNF474Q6S9Z5 364 aaPredicted RBP17.03■□□□□ 0.32
CCM2-216ENST00000488727 JAZF1Q86VZ6 243 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 ZNF100Q8IYN0 542 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 ZNRF4Q8WWF5 429 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 APH1AQ96BI3 265 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 Q96M85 177 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 PPIL3Q9H2H8 161 aaKnown RBP17.03■□□□□ 0.32
CCM2-216ENST00000488727 PARPBPQ9NWS1 579 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 RCE1Q9Y256 329 aa17.03■□□□□ 0.32
CCM2-216ENST00000488727 TRAV1-2A0A0B4J238 106 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 A0A0G2JK05 382 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 THBS2P35442 1172 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 NAA10P41227 235 aaPredicted RBP17.02■□□□□ 0.32
CCM2-216ENST00000488727 BIDP55957 195 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 CTXN1P60606 82 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 AGAP6Q5VW22 663 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 RPL22L1Q6P5R6 122 aaKnown RBP17.02■□□□□ 0.32
CCM2-216ENST00000488727 SPATC1Q76KD6 591 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 TMEM123Q8N131 208 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 GHSRQ92847 366 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 OR2M2Q96R28 347 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 COPS3Q9UNS2 423 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 ADGRG4Q8IZF6 3080 aa17.02■□□□□ 0.32
CCM2-216ENST00000488727 A0A1W2PRG6 482 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 GATBO75879 557 aaKnown RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 APEX1P27695 318 aaKnown RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 ACVR1BP36896 505 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 CDKN2AP42771 156 aaKnown RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 GDI2P50395 445 aaKnown RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 TPTEP56180 551 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 TFF3Q07654 80 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ACSM3Q53FZ2 586 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 TSPO2Q5TGU0 170 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 GPR139Q6DWJ6 353 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 SFXN4Q6P4A7 337 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 LRRC28Q86X40 367 aaPredicted RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 OR51L1Q8NGJ5 315 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 SNX33Q8WV41 574 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 TSPAN32Q96QS1 320 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ALG12Q9BV10 488 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 KCNJ16Q9NPI9 418 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ANKRD61A6NGH8 418 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 GPRIN2O60269 458 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 SELENOFO60613 162 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 IGHMP01871 453 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ASCL1P50553 236 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 HCCSP53701 268 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 CBX3Q13185 183 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 IDNKQ5T6J7 187 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ASB10Q8WXI3 467 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 PHYHIPQ92561 330 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 NEDD4LQ96PU5 975 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 SLCO5A1Q9H2Y9 848 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 TXNIPQ9H3M7 391 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 SLC7A10Q9NS82 523 aa17.01■□□□□ 0.31
CCM2-216ENST00000488727 ZNF346Q9UL40 294 aaKnown RBP17.01■□□□□ 0.31
CCM2-216ENST00000488727 NPIPB13A6NJU9 1138 aa17■□□□□ 0.31
CCM2-216ENST00000488727 NPIPB4C9JG80 1138 aa17■□□□□ 0.31
CCM2-216ENST00000488727 SLC2A2P11168 524 aaPredicted RBP17■□□□□ 0.31
CCM2-216ENST00000488727 DAP3P51398 398 aaKnown RBP17■□□□□ 0.31
CCM2-216ENST00000488727 CAMK2DQ13557 499 aa17■□□□□ 0.31
CCM2-216ENST00000488727 TAB1Q15750 504 aa17■□□□□ 0.31
CCM2-216ENST00000488727 FBXL19-AS1Q494R0 122 aa17■□□□□ 0.31
CCM2-216ENST00000488727 ZNF684Q5T5D7 378 aa17■□□□□ 0.31
CCM2-216ENST00000488727 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
CCM2-216ENST00000488727 CARD17Q5XLA6 110 aa17■□□□□ 0.31
CCM2-216ENST00000488727 SLC16A9Q7RTY1 509 aa17■□□□□ 0.31
CCM2-216ENST00000488727 RDH10Q8IZV5 341 aa17■□□□□ 0.31
CCM2-216ENST00000488727 Q8N402 240 aa17■□□□□ 0.31
CCM2-216ENST00000488727 OR6K6Q8NGW6 343 aa17■□□□□ 0.31
CCM2-216ENST00000488727 OR6X1Q8NH79 312 aa17■□□□□ 0.31
CCM2-216ENST00000488727 C11orf54Q9H0W9 315 aaPredicted RBP17■□□□□ 0.31
CCM2-216ENST00000488727 CYSLTR2Q9NS75 346 aa17■□□□□ 0.31
CCM2-216ENST00000488727 MALT1Q9UDY8 824 aa17■□□□□ 0.31
CCM2-216ENST00000488727 PLA2G10O15496 165 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 UPK3AO75631 287 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 ARL6IP5O75915 188 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 UCHL1P09936 223 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 GRNP28799 593 aaKnown RBP16.99■□□□□ 0.31
CCM2-216ENST00000488727 RPL27P61353 136 aaKnown RBP16.99■□□□□ 0.31
CCM2-216ENST00000488727 IL18Q14116 193 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 P2RY14Q15391 338 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 FBXW9Q5XUX1 488 aa16.99■□□□□ 0.31
CCM2-216ENST00000488727 TRIQKQ629K1 86 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms