RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 IFNA14P01570 189 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 IFNW1P05000 195 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 LCKP06239 509 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 MMP7P09237 267 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 OR8G3PP0DMU2 310 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF32P17041 273 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 DRD4P21917 467 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 LAP3P28838 519 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 GLRXP35754 106 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 RBM34P42696 430 aaKnown RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 SLC9A3P48764 834 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 DSCR9P59020 149 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 VLDLRP98155 873 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 COL10A1Q03692 680 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 ST3GAL3Q11203 375 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 DYRK1AQ13627 763 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 HIST3H3Q16695 136 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 CHRFAM7AQ494W8 412 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 IFI44LQ53G44 452 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 SPRNQ5BIV9 151 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 PABPC1L2AQ5JQF8 200 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 ELFN2Q5R3F8 820 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 AVPI1Q5T686 147 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 RGS7BPQ6MZT1 257 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF730Q6ZMV8 503 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 OFCC1Q8IZS5 231 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 OR52J3Q8NH60 311 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 YIPF5Q969M3 257 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 NABP1Q96AH0 204 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 RASD2Q96D21 266 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 NMD3Q96D46 503 aaKnown RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 KCTD14Q9BQ13 255 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 FNDC11Q9BVV2 318 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 SLC19A3Q9BZV2 496 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 RAB1BQ9H0U4 201 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 MYLK2Q9H1R3 596 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 RERGLQ9H628 205 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 CDH20Q9HBT6 801 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 LPAR2Q9HBW0 351 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 TAAR3PQ9P1P4 343 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 CACNG2Q9Y698 323 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 LOC100509620A0A075B734 347 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TEX13CA0A0J9YWL9 993 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TRBV4-1A0A0J9YWV2 114 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 LOC390937A0A1W2PQ73 354 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 M0R233 179 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SYNGR3O43761 229 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 LMX1BO60663 402 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CCDC22O60826 627 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 MPZL1O95297 269 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 FARS2O95363 451 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TGFAP01135 160 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 NGFP01138 241 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SERPINA5P05154 406 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CSF3P09919 207 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TSPAN19P0C672 248 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 RPL4P36578 427 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 MPV17P39210 176 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 WNT5AP41221 380 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ERFP50548 548 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 DAP3P51398 398 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF84P51523 738 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 GNGT1P63211 74 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CCL8P80075 99 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 PSG4Q00888 419 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 HSF2Q03933 536 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 PRKCDQ05655 676 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TRAM2Q15035 370 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SEC23BQ15437 767 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TSTQ16762 297 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TBC1D28Q2M2D7 210 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SLC36A2Q495M3 483 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 MESTQ5EB52 335 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 FGD3Q5JSP0 725 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 GLYATQ6IB77 296 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF774Q6NX45 483 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TMEM53Q6P2H8 277 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 PODNL1Q6PEZ8 512 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SLC25A47Q6Q0C1 308 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 PIWIL3Q7Z3Z3 882 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 HIPK1Q86Z02 1210 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CCDC36Q8IYA8 594 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF101Q8IZC7 436 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 OR1J1Q8NGS3 322 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF519Q8TB69 540 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SLC25A40Q8TBP6 338 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 GEMIN6Q8WXD5 167 aaKnown RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SLC7A6Q92536 515 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 Q96M85 177 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SEPHS2Q99611 448 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 GPA33Q99795 319 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 BEX2Q9BXY8 128 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 WNT5BQ9H1J7 359 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 TXNIPQ9H3M7 391 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms