RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NRN1LQ496H8 165 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ASPHD2Q6ICH7 369 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 C16orf87Q6PH81 154 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 KLHL24Q6TFL4 600 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 STAC2Q6ZMT1 411 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CHMP1BQ7LBR1 199 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ELMOD2Q8IZ81 293 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 RBMXL3Q8N7X1 1067 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CEP19Q96LK0 163 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 FOXB1Q99853 325 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SLC25A18Q9H1K4 315 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SLC7A10Q9NS82 523 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CLCF1Q9UBD9 225 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SVILO95425 2214 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 TRAV8-7A0A075B6U6 113 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 K7ENP7 123 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 B4GALT1P15291 398 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ADRA2CP18825 462 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ATF1P18846 271 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 APEX1P27695 318 aaKnown RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 HSD11B1P28845 292 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 IDNKQ5T6J7 187 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 MZT2AQ6P582 158 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 INO80CQ6PI98 192 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF627Q7L945 461 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 PRSS45Q7RTY3 260 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 LRRTM1Q86UE6 522 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 LRRC18Q8N456 261 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 TSEN15Q8WW01 171 aaKnown RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ASB5Q8WWX0 329 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 SDHCQ99643 169 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 PBOV1Q9GZY1 135 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 OCEL1Q9H607 264 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 COMMD3Q9UBI1 195 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 DAPK2Q9UIK4 370 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 HHLA2Q9UM44 414 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 CLEC4AQ9UMR7 237 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 PDCD5O14737 125 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ACSM4P0C7M7 580 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 SLC2A2P11168 524 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 FSTP19883 344 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ANOS1P23352 680 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 AGTR1P30556 359 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF79Q15937 498 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 RSPO1Q2MKA7 263 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 TMEM244Q5VVB8 128 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 RPUSD3Q6P087 351 aaKnown RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 NUFIP2Q7Z417 695 aaKnown RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 MCEMP1Q8IX19 187 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 SLC22A24Q8N4F4 322 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 APH1AQ96BI3 265 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 KCNJ15Q99712 375 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 DHDHQ9UQ10 334 aa8.29□□□□□ -1.08
SF3B1-211ENST00000487698 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
SF3B1-211ENST00000487698 IFITM5A6NNB3 132 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 MKRN2OSH3BPM6 223 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 H3BSH0 61 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 HPGDSO60760 199 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 TMEM127O75204 238 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 UPK1BO75841 260 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 IGHV3-9P01782 118 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 CRYGSP22914 178 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 CFPP27918 469 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 CX3CR1P49238 355 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 PRKXP51817 358 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF121P58317 390 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-211ENST00000487698 RAB35Q15286 201 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 TAF13Q15543 124 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 OR8B12Q8NGG6 310 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 SARAFQ96BY9 339 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 SOSTQ9BQB4 213 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 HDHD2Q9H0R4 259 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 SLITRK2Q9H156 845 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 SLC5A6Q9Y289 635 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
SF3B1-211ENST00000487698 A0A1B0GTI1 187 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 OR6C6A6NF89 314 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 TTLL8A6PVC2 850 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF587BE7ETH6 402 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 AIPO00170 330 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 P2RY10O00398 339 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SGCEO43556 437 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SYNGR3O43761 229 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 DOK2O60496 412 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SLC19A2O60779 497 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SS18L1O75177 396 aaPredicted RBP8.27□□□□□ -1.08
SF3B1-211ENST00000487698 MMP7P09237 267 aaPredicted RBP8.27□□□□□ -1.08
SF3B1-211ENST00000487698 IGFBP3P17936 291 aaPredicted RBP8.27□□□□□ -1.08
SF3B1-211ENST00000487698 CCL1P22362 96 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 EVX1P49640 407 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SCRN3Q0VDG4 424 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms