RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SVEP1Q4LDE5 3571 aa9.73□□□□□ -0.85
SPEN-205ENST00000487496 ATRQ13535 2644 aa9.73□□□□□ -0.85
SPEN-205ENST00000487496 B4DSR2 109 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 CLDN25C9JDP6 229 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 ACOT8O14734 319 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 TIMM8AO60220 97 aaPredicted RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 UBOX5O94941 541 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 SRD5A1P18405 259 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 KITLGP21583 273 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 GGT2P36268 569 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 LMO4P61968 165 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 MVKQ03426 396 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 MICAQ29983 383 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 RSPO1Q2MKA7 263 aaPredicted RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 SLC36A3Q495N2 470 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 SPRNQ5BIV9 151 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 ZMAT1Q5H9K5 638 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 ZNF362Q5T0B9 420 aaPredicted RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 AVPI1Q5T686 147 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 SLC18B1Q6NT16 456 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 RASSF6Q6ZTQ3 369 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 TRPM8Q7Z2W7 1104 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 OR8D4Q8NGM9 314 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 CCL17Q92583 94 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 HAVCR1Q96D42 359 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 LRGUKQ96M69 825 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 COG8Q96MW5 612 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 DIRC2Q96SL1 478 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 EGLN1Q9GZT9 426 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 HDHD2Q9H0R4 259 aa9.72□□□□□ -0.85
SPEN-205ENST00000487496 TMEFF2Q9UIK5 374 aaPredicted RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 PURGQ9UJV8 347 aaKnown RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 SAMHD1Q9Y3Z3 626 aaKnown RBP9.72□□□□□ -0.85
SPEN-205ENST00000487496 CUBNO60494 3623 aa9.71□□□□□ -0.85
SPEN-205ENST00000487496 J3QW42 95 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 HLA-DQA2P01906 255 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 CD55P08174 381 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 RAP2AP10114 183 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 RAC2P15153 192 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 HNF1AP20823 631 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 RGS6P49758 472 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 ERFP50548 548 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 DVL1P1P54792 670 aaPredicted RBP9.71□□□□□ -0.86
SPEN-205ENST00000487496 TNFAIP6P98066 277 aaPredicted RBP9.71□□□□□ -0.86
SPEN-205ENST00000487496 TRAP1Q12931 704 aaKnown RBP9.71□□□□□ -0.86
SPEN-205ENST00000487496 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 CFAP77Q6ZQR2 320 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 Q6ZR03 302 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 LINC00346Q8IVM7 164 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 CYB561A3Q8NBI2 242 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.86
SPEN-205ENST00000487496 CHID1Q9BWS9 393 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 TSSK6Q9BXA6 273 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 DGCR6LQ9BY27 220 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 TBC1D23Q9NUY8 699 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 MRPL22Q9NWU5 206 aaKnown RBP9.71□□□□□ -0.86
SPEN-205ENST00000487496 CYB5R1Q9UHQ9 305 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 WIPI2Q9Y4P8 454 aa9.71□□□□□ -0.86
SPEN-205ENST00000487496 MSMBP08118 114 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 PYCR1P32322 319 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 THBS2P35442 1172 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 HLXQ14774 488 aaPredicted RBP9.7□□□□□ -0.86
SPEN-205ENST00000487496 FBXW12Q6X9E4 464 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 CXXC5Q7LFL8 322 aaKnown RBP9.7□□□□□ -0.86
SPEN-205ENST00000487496 GLCCI1Q86VQ1 547 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 ADGRG5Q8IZF4 528 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 LNX2Q8N448 690 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 SLC37A3Q8NCC5 494 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 PROKR2Q8NFJ6 384 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR2Z1Q8NG97 314 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR10G2Q8NGC3 310 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR51L1Q8NGJ5 315 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR5L1Q8NGL2 311 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR2AJ1Q8NGZ0 328 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR2T4Q8NH00 348 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 OR4Q3Q8NH05 313 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 CANT1Q8WVQ1 401 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 ZNRF4Q8WWF5 429 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 RAB1CQ92928 201 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 TMEM186Q96B77 213 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 TIMD4Q96H15 378 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 PITX2Q99697 317 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 LPAR2Q9HBW0 351 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 PNRC2Q9NPJ4 139 aaKnown RBP9.7□□□□□ -0.86
SPEN-205ENST00000487496 PTTG3PQ9NZH4 202 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 KCNG2Q9UJ96 466 aa9.7□□□□□ -0.86
SPEN-205ENST00000487496 DHRS12A0PJE2 317 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 TVP23AA6NH52 213 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 AQP12BA6NM10 295 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 F5H5K5 113 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 GYG2O15488 501 aa9.69□□□□□ -0.86
SPEN-205ENST00000487496 PHF1O43189 567 aaPredicted RBP9.69□□□□□ -0.86
SPEN-205ENST00000487496 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms