RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZNF565Q8N9K5 539 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 OR56B1Q8NGI3 324 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ASB5Q8WWX0 329 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 PMM1Q92871 262 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 OR10C1Q96KK4 312 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF587Q96SQ5 575 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-208ENST00000486641 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 UCK1Q9HA47 277 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 DAPP1Q9UN19 280 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 AMDHD2Q9Y303 409 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 STARD10Q9Y365 291 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 WNT6Q9Y6F9 365 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 COL4A6Q14031 1691 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 A0A087WV62 115 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 A0A0A6YYH2 397 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF860A6NHJ4 632 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 A6NJ64 397 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 H7C1Q1 480 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 FGF17O60258 216 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 LRG1P02750 347 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 S100A2P29034 98 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 CMPK1P30085 196 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 TLX1P31314 330 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-208ENST00000486641 SNCAP37840 140 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 SPOCK1Q08629 439 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 MGAT2Q10469 447 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 MEP1BQ16820 701 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 PRICKLE4Q2TBC4 344 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 EEF1A1P5Q5VTE0 462 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF574Q6ZN55 896 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-208ENST00000486641 JAGN1Q8N5M9 183 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 LRRC75AQ8NAA5 344 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM52Q8NDY8 209 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 SLC25A43Q8WUT9 341 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ADAM19Q9H013 955 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 LMAN1LQ9HAT1 526 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 HCFC1R1Q9NWW0 138 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 GAR1Q9NY12 217 aaKnown RBP9.55□□□□□ -0.88
CCDC171-208ENST00000486641 COLEC10Q9Y6Z7 277 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 LAMA2P24043 3122 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 RAB27BO00194 218 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 IFNA6P05013 189 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 IGFBP3P17936 291 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 MAS1LP35410 378 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 GPR18Q14330 331 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 SLC17A1Q14916 467 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 ITPRIPL2Q3MIP1 535 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 ALG10Q5BKT4 473 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 FCRL6Q6DN72 434 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 FDX2Q6P4F2 183 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 SLC35D2Q76EJ3 337 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF550Q7Z398 422 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 REC114Q7Z4M0 266 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HOGA1Q86XE5 327 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 C10orf53Q8N6V4 93 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CSNK1A1LQ8N752 337 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CHST4Q8NCG5 386 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CPNE4Q96A23 557 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 FOXN4Q96NZ1 517 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 MOGAT1Q96PD6 335 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 INTS14Q96SY0 518 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 POLE3Q9NRF9 147 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 PARPBPQ9NWS1 579 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 GFOD1Q9NXC2 390 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 PPP4R1LQ9P1A2 415 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CKLFQ9UBR5 152 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 GDF2Q9UK05 429 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 OR1A2Q9Y585 309 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HEATR5AQ86XA9 2040 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 IGKV1D-42A0A075B6H8 117 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 NKX2-2O95096 273 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TSPAN15O95858 294 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HKR1P10072 659 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CD37P11049 281 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CEBPBP17676 345 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 GRK6P43250 576 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 RPS10P46783 165 aaKnown RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 MESP2Q0VG99 397 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 GUK1Q16774 197 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 ACTBL2Q562R1 376 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 MESTQ5EB52 335 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 OR2A2Q6IF42 318 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CLEC18BQ6UXF7 455 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HEPN1Q6WQI6 88 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 RTN4RL2Q86UN3 420 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 CCDC54Q8NEL0 328 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 OR4D6Q8NGJ1 314 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 OR10D4PQ8NGN7 298 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms