RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ATP5SQ99766 215 aa2.22□□□□□ -2.05
LTN1-206ENST00000486427 ANGPTL4Q9BY76 406 aa2.22□□□□□ -2.05
LTN1-206ENST00000486427 RACGAP1Q9H0H5 632 aa2.22□□□□□ -2.05
LTN1-206ENST00000486427 HPCAL4Q9UM19 191 aa2.22□□□□□ -2.05
LTN1-206ENST00000486427 LTBP4Q8N2S1 1624 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 TRAV6A0A075B6T7 132 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 A0A1W2PNN7 141 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 TMEM120BA0PK00 339 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 XKRY2A2RUG3 117 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 BTNL10A8MVZ5 291 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 H6PDO95479 791 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 TSPAN13O95857 204 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 CSNK1EP49674 416 aaKnown RBP2.21□□□□□ -2.06
LTN1-206ENST00000486427 CCNG1P51959 295 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 RBX1P62877 108 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 CCNA1P78396 465 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 FUT5Q11128 374 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 OR7A5Q15622 319 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 ZNF726P1Q15940 193 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 VPS26BQ4G0F5 336 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 GUSBP11Q6P575 273 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 FAM228AQ86W67 206 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 APCDD1LQ8NCL9 501 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 C1orf64Q8NEQ6 169 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 OR5M1Q8NGP8 315 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 OR2A1Q8NGT9 310 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 LRRC29Q8WV35 223 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 TVP23CQ96ET8 276 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 OR5B12Q96R08 314 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 ILKAPQ9H0C8 392 aaPredicted RBP2.21□□□□□ -2.06
LTN1-206ENST00000486427 PSMC3IPQ9P2W1 217 aaPredicted RBP2.21□□□□□ -2.06
LTN1-206ENST00000486427 ZNF230Q9UIE0 474 aaPredicted RBP2.21□□□□□ -2.06
LTN1-206ENST00000486427 SIGLEC7Q9Y286 467 aa2.21□□□□□ -2.06
LTN1-206ENST00000486427 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
LTN1-206ENST00000486427 AKNAQ7Z591 1439 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 RDH16O75452 317 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 SERPINA5P05154 406 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 EIF4EP06730 217 aaKnown RBP2.2□□□□□ -2.06
LTN1-206ENST00000486427 UQCRFS1P1P0C7P4 283 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 CHMLP26374 656 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 VSX2P58304 361 aaPredicted RBP2.2□□□□□ -2.06
LTN1-206ENST00000486427 PPP1CBP62140 327 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 COX18Q8N8Q8 333 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 TMEM104Q8NE00 496 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 AKR7LQ8NHP1 331 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 CDX2Q99626 313 aaPredicted RBP2.2□□□□□ -2.06
LTN1-206ENST00000486427 GGTLC1Q9BX51 225 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 FRMD8P1Q9BZ68 369 aaPredicted RBP2.2□□□□□ -2.06
LTN1-206ENST00000486427 EXOSC4Q9NPD3 245 aaKnown RBP2.2□□□□□ -2.06
LTN1-206ENST00000486427 TMEM9BQ9NQ34 198 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 USP47Q96K76 1375 aa2.2□□□□□ -2.06
LTN1-206ENST00000486427 TRAV19A0A0A6YYK7 116 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 IGKV1-8A0A0C4DH67 115 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 IGHV7-4-1A0A0J9YVY3 117 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 LRRIQ3A6PVS8 624 aaPredicted RBP2.19□□□□□ -2.06
LTN1-206ENST00000486427 MPHOSPH10O00566 681 aaKnown RBP2.19□□□□□ -2.06
LTN1-206ENST00000486427 SLC22A5O76082 557 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 LGALS3P17931 250 aaKnown RBP2.19□□□□□ -2.06
LTN1-206ENST00000486427 PRR3P79522 188 aaKnown RBP2.19□□□□□ -2.06
LTN1-206ENST00000486427 QPRTQ15274 297 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 TCEAL5Q5H9L2 206 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 CERS6Q6ZMG9 384 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 TAS2R42Q7RTR8 314 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 ZNF101Q8IZC7 436 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 NPWQ8N729 165 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 OR7G2Q8NG99 324 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 TCEAL3Q969E4 200 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 CCDC126Q96EE4 140 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 NEUROG2Q9H2A3 272 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 OR51M1Q9H341 326 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 PALLDQ8WX93 1383 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 ANKRD12Q6UB98 2062 aa2.19□□□□□ -2.06
LTN1-206ENST00000486427 SNX4O95219 450 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 TNNI1P19237 187 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 GGT1P19440 569 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 PBLDP30039 288 aaPredicted RBP2.18□□□□□ -2.06
LTN1-206ENST00000486427 FOXN2P32314 431 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 NAA10P41227 235 aaPredicted RBP2.18□□□□□ -2.06
LTN1-206ENST00000486427 ACLYP53396 1101 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 GFERP55789 205 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 SYNJ2BPP57105 145 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 RPS11P62280 158 aaKnown RBP eCLIP2.18□□□□□ -2.06
LTN1-206ENST00000486427 ADARB1P78563 741 aaKnown RBP2.18□□□□□ -2.06
LTN1-206ENST00000486427 PPP1R7Q15435 360 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 FAM222AQ5U5X8 452 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 PRELID2Q8N945 189 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 RAB3IL1Q8TBN0 382 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 KLF14Q8TD94 323 aaPredicted RBP2.18□□□□□ -2.06
LTN1-206ENST00000486427 ACMSDQ8TDX5 336 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 RASD2Q96D21 266 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 WDR34Q96EX3 536 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 IP6K3Q96PC2 410 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 SLC29A1Q99808 456 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 MICU1Q9BPX6 476 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 SHANK2-AS3Q9BTD1 123 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 RSG1Q9BU20 258 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 C21orf62Q9NYP8 219 aa2.18□□□□□ -2.06
LTN1-206ENST00000486427 IGHV3-72A0A0B4J1Y9 119 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 HEATR9A2RTY3 570 aa2.17□□□□□ -2.06
LTN1-206ENST00000486427 KRBOX1C9JBD0 128 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms