RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 METTL15A6NJ78 407 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 CENPBD1B2RD01 187 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SHISA9B4DS77 424 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 XKRYO14609 159 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 PHYHO14832 338 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 GPRIN2O60269 458 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 CYTIPO60759 359 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 CD3EP07766 207 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SPI1P17947 270 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 IL32P24001 234 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 GTF2E2P29084 291 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 S100A5P33763 92 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 OR3A2P47893 321 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 RORCP51449 518 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 BMXP51813 675 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 RPL27P61353 136 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 RASGEF1BQ0VAM2 473 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 KRR1Q13601 381 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 RNPS1Q15287 305 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF672Q499Z4 452 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 CCDC58Q4VC31 144 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 OR2G6Q5TZ20 316 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 LIPKQ5VXJ0 399 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 PAQR6Q6TCH4 344 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 HDDC2Q7Z4H3 204 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 MS4A15Q8N5U1 240 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 ARIH2OSQ8N7S6 290 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SDR9C7Q8NEX9 313 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 OR10H4Q8NGA5 316 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SPRYD4Q8WW59 207 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 ARL5BQ96KC2 179 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 Q96M85 177 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 KCTD7Q96MP8 289 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 NMNAT3Q96T66 252 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 CENPOQ9BU64 300 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 HCAR1Q9BXC0 346 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 C1QTNF6Q9BXI9 259 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 OR11A1Q9GZK7 315 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 KCNN2Q9H2S1 579 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 TXNIPQ9H3M7 391 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 MED20Q9H944 212 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 EXOSC4Q9NPD3 245 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 TAS2R5Q9NYW4 299 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 B3GALT5Q9Y2C3 310 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 SF3B6Q9Y3B4 125 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 ADAM18Q9Y3Q7 739 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 TMEM14AQ9Y6G1 99 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 FAM171A2A8MVW0 826 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 FTCDNL1E5RQL4 147 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 LRRN3E7EW58 273 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 PLPP3O14495 311 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 PLPP2O43688 288 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SERPINA3P01011 423 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 TACSTD2P09758 323 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 CFL1P23528 166 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 CD40LGP29965 261 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 GRPRP30550 384 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 ENTPD1P49961 510 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 DAP3P51398 398 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 GBX2P52951 348 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 RAC3P60763 192 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF45Q02386 682 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 RUNX1T1Q06455 604 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 P2RY6Q15077 328 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 C3orf33Q6P1S2 294 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 LEG1Q6P5S2 330 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 B3GLCTQ6Y288 498 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 PLEKHG7Q6ZR37 379 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 H1FNTQ75WM6 255 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SHFQ7M4L6 423 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC16A9Q7RTY1 509 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 IGFN1Q86VF2 1251 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC35F2Q8IXU6 374 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 TMEM99Q8N816 258 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 CYB561A3Q8NBI2 242 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 OR52N5Q8NH56 324 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SPATA3Q8NHX4 192 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 PHYHIPQ92561 330 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 AP3S1Q92572 193 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 FBXW5Q969U6 566 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SH3GL3Q99963 347 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 ALG12Q9BV10 488 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 HDHD5Q9BXW7 423 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 REG4Q9BYZ8 158 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 OR10A4Q9H209 315 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 SLCO5A1Q9H2Y9 848 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 MARCH7Q9H992 704 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 AKIP1Q9NQ31 210 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 TIGARQ9NQ88 270 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 TXNL4BQ9NX01 149 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 TRAPPC4Q9Y296 219 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 HDGFL3Q9Y3E1 203 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 FKBP7Q9Y680 259 aa8.2□□□□□ -1.1
TMEM39A-208ENST00000486159 CHD3Q12873 2000 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms