RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PMF1-BGLAPU3KQ54 211 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 MYO9AB2RTY4 2548 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 ARID1AO14497 2285 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 ARFGEF3Q5TH69 2177 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 A0A1W2PPW3 197 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 F5H5K5 113 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 H0YHG0 523 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 NDUFS7O75251 213 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 CLPTM1O96005 669 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 BMP4P12644 408 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 KLF3P57682 345 aaPredicted RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 ECH1Q13011 328 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 MAD2L1BPQ15013 274 aaPredicted RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 TAF13Q15543 124 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 EFNB3Q15768 340 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 PCK2Q16822 640 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 ALKBH6Q3KRA9 238 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 TEX30Q5JUR7 227 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 Q5PR19 223 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 NXNL2Q5VZ03 156 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 SHFQ7M4L6 423 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 GID4Q8IVV7 300 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 OR8J1Q8NGP2 316 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 SLC25A40Q8TBP6 338 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 HRASLS5Q96KN8 279 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 VRK1Q99986 396 aaPredicted RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 OR2J1Q9GZK6 312 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 DCLRE1BQ9H816 532 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 ZNF701Q9NV72 531 aaPredicted RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 SMPD3Q9NY59 655 aaPredicted RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 MYEF2Q9P2K5 600 aaKnown RBP10.18□□□□□ -0.78
HPS4-214ENST00000485842 GMPPBQ9Y5P6 360 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 CREBBPQ92793 2442 aa10.18□□□□□ -0.78
HPS4-214ENST00000485842 PRRC2AP48634 2157 aaKnown RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 TMEM129A0AVI4 362 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ZNF878C9JN71 531 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ICMTO60725 284 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 GCH1P30793 250 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 MPV17P39210 176 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ALDH3B1P43353 468 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 SLC6A9P48067 706 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 RGS6P49758 472 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 PRKXP51817 358 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 SELENOVP59797 346 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 EFNB1P98172 346 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 NKPD1Q17RQ9 610 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ZNF718Q3SXZ3 478 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 AADACL4Q5VUY2 407 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 MEPCEQ7L2J0 689 aaKnown RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 SLC16A9Q7RTY1 509 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 LRRC75A-AS1Q8N1F1 130 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 SYNPRQ8TBG9 265 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ST7LQ8TDW4 575 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 THEM6Q8WUY1 208 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 SPTSSAQ969W0 71 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 DCLRE1CQ96SD1 692 aaKnown RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 AMELYQ99218 206 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 CNN2Q99439 309 aaKnown RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 TEAD3Q99594 435 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 ABHD6Q9BV23 337 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 TTTY10Q9BZA0 68 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 CXXC4Q9H2H0 198 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 POFUT1Q9H488 388 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 PTTG3PQ9NZH4 202 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 NKX1-2Q9UD57 310 aaPredicted RBP10.17□□□□□ -0.78
HPS4-214ENST00000485842 STARD10Q9Y365 291 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
HPS4-214ENST00000485842 SLC22A31A6NKX4 558 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 H7C417 338 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 M0R135 149 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 M0R233 179 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 LCATP04180 440 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 LYNP07948 512 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 ADRA2AP08913 450 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 ACSM4P0C7M7 580 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF250P15622 560 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 PAX1P15863 534 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 HSD11B1P28845 292 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 PPOXP50336 477 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 NUDT6P53370 316 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 HCCSP53701 268 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 TPTEP56180 551 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 RSPO1Q2MKA7 263 aaPredicted RBP10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF283Q8N7M2 679 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF555Q8NEP9 628 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 OTOSQ8NHW6 89 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 KLF14Q8TD94 323 aaPredicted RBP10.16□□□□□ -0.78
HPS4-214ENST00000485842 UBE2FQ969M7 185 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 APOBEC3DQ96AK3 386 aaPredicted RBP10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
HPS4-214ENST00000485842 ZNF582Q96NG8 517 aaPredicted RBP10.16□□□□□ -0.78
HPS4-214ENST00000485842 SORCS2Q96PQ0 1159 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 DOK1Q99704 481 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 TPK1Q9H3S4 243 aa10.16□□□□□ -0.78
HPS4-214ENST00000485842 DDX28Q9NUL7 540 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms