RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 LSM6P62312 80 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 BLOC1S1P78537 153 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 RPL19P84098 196 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 CDK3Q00526 305 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 IL5RAQ01344 420 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 DEFA6Q01524 100 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 IFITM3Q01628 133 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SP3Q02447 781 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 BCL2L1Q07817 233 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TWF1Q12792 350 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TCF15Q12870 199 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SRSF6Q13247 344 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 KRR1Q13601 381 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF169Q14929 603 aaPredicted RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TNXAQ16473 311 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF181Q2M3W8 571 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PDZD11Q5EBL8 140 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ACER2Q5QJU3 275 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 C9orf135Q5VTT2 229 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 LIPKQ5VXJ0 399 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SLX4IPQ5VYV7 408 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 STUMQ69YW2 141 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SP5Q6BEB4 398 aaPredicted RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 GRHL2Q6ISB3 625 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PRR27Q6MZM9 219 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 NOXRED1Q6NXP6 359 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ACSM6Q6P461 480 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 DNM1P34Q6PK57 102 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 BTNL8Q6UX41 500 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 GCNT7Q6ZNI0 430 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 GDPGP1Q6ZNW5 385 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SSX7Q7RTT5 188 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SSX6Q7RTT6 188 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TSEN54Q7Z6J9 526 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM150AQ86TG1 271 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 RNF130Q86XS8 419 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC30A8Q8IWU4 369 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PUSL1Q8N0Z8 303 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM251Q8N6I4 163 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 BOLLQ8N9W6 283 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 Q8NA96 180 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 LRRC75AQ8NAA5 344 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC38A9Q8NBW4 561 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF738Q8NE65 137 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 OR4A4PQ8NGN8 299 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 OR13C5Q8NGS8 318 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 OR11L1Q8NGX0 322 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 OR6X1Q8NH79 312 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 COQ8AQ8NI60 647 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 WDR20Q8TBZ3 569 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SPPL2AQ8TCT8 520 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 C2CD4CQ8TF44 421 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TCEAL3Q969E4 200 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 OTULINQ96BN8 352 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TAMM41Q96BW9 452 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 LGALS12Q96DT0 336 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 WDR34Q96EX3 536 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PRAP1Q96NZ9 151 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC38A2Q96QD8 506 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SMIM14Q96QK8 99 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 IL4I1Q96RQ9 567 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PFDN5Q99471 154 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 DOHHQ9BU89 302 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 C1QTNF7Q9BXJ2 289 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SYT4Q9H2B2 425 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 DSN1Q9H410 356 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM38AQ9H6F2 299 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 REEP1Q9H902 201 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 MARCH7Q9H992 704 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TBC1D17Q9HA65 648 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 RHOFQ9HBH0 211 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 CDH20Q9HBT6 801 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 Q9N2J8 555 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 FZD3Q9NPG1 666 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 NANSQ9NR45 359 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM74BQ9NUR3 256 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SDHAF2Q9NX18 166 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 GAR1Q9NY12 217 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 NPAP1Q9NZP6 1156 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 FAM30AQ9NZY2 134 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PSORS1C1Q9UIG5 152 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 KCNE5Q9UJ90 142 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 NDRG2Q9UN36 371 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 HS3ST2Q9Y278 367 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 PRELID3BQ9Y3B1 194 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 NUBP2Q9Y5Y2 271 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 MRPS18BQ9Y676 258 aaKnown RBP3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 CDH10Q9Y6N8 788 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 SCN8AQ9UQD0 1980 aa3.57□□□□□ -1.84
PRPF38B-205ENST00000485810 TRBV7-9A0A0J9YWB2 115 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 PNMA8CA0A1B0GUJ8 204 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 TSPAN11A1L157 253 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 PSMB11A5LHX3 300 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 ANKUB1A6NFN9 424 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 NPIPA5E9PKD4 350 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 NPIPA3F8WFD2 350 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 G3V3Y1 287 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms