RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 APLNRP35414 380 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 KIR2DL3P43628 341 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 GRB2P62993 217 aaKnown RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 RSPO1Q2MKA7 263 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 KRTAP27-1Q3LI81 207 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 CDONQ4KMG0 1287 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 PLEKHG7Q6ZR37 379 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 MYPOPQ86VE0 399 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 DMRTC2Q8IXT2 367 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 SLC30A7Q8NEW0 376 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 POM121L2Q96KW2 1035 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 MROQ9BYG7 248 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 CCDC90BQ9GZT6 254 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 ELOVL3Q9HB03 270 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 MRM2Q9UI43 246 aaKnown RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 PRSS44E7EML9 344 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 SULT1C4O75897 302 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 KRT8P05787 483 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 CECR9P0C854 216 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 CRYGSP22914 178 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 GDI2P50395 445 aaKnown RBP15.25■□□□□ 0.03
CHMP3-207ENST00000485465 CDH15P55291 814 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 ACTA2P62736 377 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 ACTG2P63267 376 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 IRF3Q14653 427 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 TP53I3Q53FA7 332 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 KCTD20Q7Z5Y7 419 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 KLHL36Q8N4N3 616 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 ACBD4Q8NC06 268 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 OR1J2Q8NGS2 313 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 SLC7A6Q92536 515 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 SPTSSAQ969W0 71 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 KCNJ15Q99712 375 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF696Q9H7X3 374 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 CRIM1Q9NZV1 1036 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 CAB39Q9Y376 341 aaPredicted RBP15.25■□□□□ 0.03
CHMP3-207ENST00000485465 LRP12Q9Y561 859 aa15.25■□□□□ 0.03
CHMP3-207ENST00000485465 C5orf49A4QMS7 147 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 F5H5K5 113 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 J3QLW9 94 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 CASKO14936 926 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 CLDN1O95832 211 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 ABHD16AO95870 558 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 DBHP09172 617 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 EPXP11678 715 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 CCL2P13500 99 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF19P17023 458 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 HSD11B1P28845 292 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 OTX1P32242 354 aaPredicted RBP15.24■□□□□ 0.03
CHMP3-207ENST00000485465 RIDAP52758 137 aaKnown RBP15.24■□□□□ 0.03
CHMP3-207ENST00000485465 OR12D2P58182 307 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 GALK2Q01415 458 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 TBC1D28Q2M2D7 210 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 TMPRSS11AQ6ZMR5 421 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 EGFL6Q8IUX8 553 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 SYS1Q8N2H4 156 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 NANOGP1Q8N7R0 232 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 YIPF7Q8N8F6 280 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 IL17RDQ8NFM7 739 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 FAM222BQ8WU58 562 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 C4orf36Q96KX1 117 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 NIPAL2Q9H841 368 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 ISG20L2Q9H9L3 353 aaKnown RBP15.24■□□□□ 0.03
CHMP3-207ENST00000485465 GNG8Q9UK08 70 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 ERGIC3Q9Y282 383 aa15.24■□□□□ 0.03
CHMP3-207ENST00000485465 CACNA1CQ13936 2221 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 TMEM129A0AVI4 362 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 DPRXA6NFQ7 191 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 TACSTD2P09758 323 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 CCNOP22674 350 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 PTAFRP25105 342 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 CD40P25942 277 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 DCTDP32321 178 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 PRKXP51817 358 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 TPTEP56180 551 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 NAAAQ02083 359 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 OR2G6Q5TZ20 316 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 LIPNQ5VXI9 398 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF773Q6PK81 442 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 TMEM108Q6UXF1 575 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 MEX3BQ6ZN04 569 aaKnown RBP15.23■□□□□ 0.03
CHMP3-207ENST00000485465 FAM220AQ7Z4H9 259 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-207ENST00000485465 OR52N1Q8NH53 320 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 SPRYD4Q8WW59 207 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-207ENST00000485465 DCLRE1CQ96SD1 692 aaKnown RBP15.23■□□□□ 0.03
CHMP3-207ENST00000485465 CDH20Q9HBT6 801 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 SNX5Q9Y5X3 404 aa15.23■□□□□ 0.03
CHMP3-207ENST00000485465 USP9XQ93008 2570 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-207ENST00000485465 DOPEY1Q5JWR5 2465 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 IGHV2OR16-5A0A0B4J2B6 119 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 A1L4Q6 167 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 M0R135 149 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 MYL12BO14950 172 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 APOC1P02654 83 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 MT-ND5P03915 603 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 ACSM4P0C7M7 580 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF35P13682 527 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms