RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TBCCD1Q9NVR7 557 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 NDUFAF4Q9P032 175 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 TAAR3PQ9P1P4 343 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 ADAM21Q9UKJ8 722 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 TMCC3Q9ULS5 477 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 ARL2BPQ9Y2Y0 163 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GRIP1Q9Y3R0 1128 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 RAI1Q7Z5J4 1906 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 RTTNQ86VV8 2226 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TRAV27A0A087WT01 109 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 A0A0A6YYJ9 748 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TEX13CA0A0J9YWL9 993 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 A0A1W2PPL8 197 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 OR6C6A6NF89 314 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 C9orf118A6NHY6 69 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 UNC119BA6NIH7 251 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 RNF212BA8MTL3 300 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 CLDN25C9JDP6 229 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 IFNL4K9M1U5 179 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TPD52L2O43399 206 aaKnown RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 PPIHO43447 177 aaKnown RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 KHDRBS3O75525 346 aaKnown RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 LY6HO94772 140 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 PRSS23O95084 383 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SLC2A10O95528 541 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 MPIG6BO95866 241 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ABHD16AO95870 558 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TXNDC12O95881 172 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 PATE4P0C8F1 98 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF32P17041 273 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 MAKP20794 623 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 CCNOP22674 350 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 LAP3P28838 519 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 CDAP32320 146 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 CRYBB2P43320 205 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ALDH3B1P43353 468 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 YAP1P46937 504 aaKnown RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF81P51508 661 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 DVL1P1P54792 670 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ERVK-25P63136 954 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 MYBPC1Q00872 1141 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 PSG4Q00888 419 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 GLO1Q04760 184 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SF3A3Q12874 501 aaKnown RBP eCLIP5.26□□□□□ -1.573e-6■□□□□ 8.7
PTCD3-215ENST00000484203 ECH1Q13011 328 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 AQP6Q13520 282 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 GK3PQ14409 553 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SLC36A3Q495N2 470 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 FGD3Q5JSP0 725 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SLC27A4Q6P1M0 643 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 CXXC5Q7LFL8 322 aaKnown RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 GLCCI1Q86VQ1 547 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 PGAM4Q8N0Y7 254 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 LRRC75AQ8NAA5 344 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ICA1LQ8NDH6 482 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 OR1J1Q8NGS3 322 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 OR51F2Q8NH61 342 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SLC7A13Q8TCU3 470 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 NABP1Q96AH0 204 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 C4orf45Q96LM5 186 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 NSMCE2Q96MF7 247 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF570Q96NI8 536 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TSPAN32Q96QS1 320 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SNX18Q96RF0 628 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 FAM107BQ9H098 131 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 MUC13Q9H3R2 512 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TPK1Q9H3S4 243 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SAP30LQ9HAJ7 183 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 NRIP3Q9NQ35 241 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 POLE4Q9NR33 117 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 VSX1Q9NZR4 365 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-215ENST00000484203 RHCGQ9UBD6 479 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 TAGLN3Q9UI15 199 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SIGLEC7Q9Y286 467 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 UGT2A1Q9Y4X1 527 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 SNX13Q9Y5W8 968 aa5.26□□□□□ -1.57
PTCD3-215ENST00000484203 NBEAL1Q6ZS30 2694 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 IGHV1-69-2A0A0G2JMI3 117 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 ARPC3O15145 178 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SGCEO43556 437 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 PIP5K1CO60331 668 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SLC16A7O60669 478 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 PTP4A3O75365 173 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 GADD45GO95257 159 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RENP00797 406 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 FABP3P05413 133 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 MSMBP08118 114 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 CD55P08174 381 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SELEP16581 610 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 FPR3P25089 353 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RRM2P31350 389 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SLC6A6P31641 620 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SRP14P37108 136 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 PPP1CBP62140 327 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 IL13RA1P78552 427 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 CCL8P80075 99 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 MXRA7P84157 204 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms