RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LINGO2Q7L985 606 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 SSX8Q7RTT4 187 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 P2RY8Q86VZ1 359 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ANKRD13BQ86YJ7 626 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 CLVS1Q8IUQ0 354 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 C17orf78Q8N4C9 275 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 SMAP2Q8WU79 429 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 SPTSSAQ969W0 71 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 MOB1AQ9H8S9 216 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 ISG20L2Q9H9L3 353 aaKnown RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 NDUFB11Q9NX14 153 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 MRM2Q9UI43 246 aaKnown RBP12.25□□□□□ -0.45
SMAD9-204ENST00000483941 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
SMAD9-204ENST00000483941 OGG1O15527 345 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 SGCEO43556 437 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 CGAP01215 116 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 HLA-DPB1P04440 258 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 CELP19835 753 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 OPRL1P41146 370 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 CCR9P51686 369 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 UBE2NP61088 152 aaKnown RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 HIST1H3AP68431 136 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 DBPQ10586 325 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 HIST2H3PS2Q5TEC6 136 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 GPR107Q5VW38 600 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 FDX2Q6P4F2 183 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 PAMR1Q6UXH9 720 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 SSX6Q7RTT6 188 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 MRGPRGQ86SM5 289 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 PHC2Q8IXK0 858 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 OR1K1Q8NGR3 316 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 TMIGD2Q96BF3 282 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 YIPF6Q96EC8 236 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 DNHD1Q96M86 4753 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 ATF6BQ99941 703 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 COMMD4Q9H0A8 199 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 RNF121Q9H920 327 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 DDX28Q9NUL7 540 aaKnown RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 SLCO1C1Q9NYB5 712 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 ELOVL5Q9NYP7 299 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 PLEK2Q9NYT0 353 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 RSL24D1Q9UHA3 163 aaKnown RBP12.24□□□□□ -0.45
SMAD9-204ENST00000483941 TINAGQ9UJW2 476 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 KLHDC2Q9Y2U9 406 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
SMAD9-204ENST00000483941 TRBV2A0A0J9YWF9 115 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 A0A1B0GUH1 482 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 OR6C6A6NF89 314 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 TOXO94900 526 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 ABHD16AO95870 558 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 COX5BP10606 129 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 COX5AP20674 150 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 EDNRAP25101 427 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LIPAP38571 399 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
SMAD9-204ENST00000483941 MMP16P51512 607 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 FOXF2Q12947 444 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 CDK5R1Q15078 307 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LIPKQ5VXJ0 399 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 VWA1Q6PCB0 445 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 CORO6Q6QEF8 472 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LRRN1Q6UXK5 716 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 SKA3Q8IX90 412 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 PHYHIPQ92561 330 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 BCL2L2Q92843 193 aaPredicted RBP12.23□□□□□ -0.45
SMAD9-204ENST00000483941 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 FBXO17Q96EF6 278 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LRRC46Q96FV0 321 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 MAP6Q96JE9 813 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 KCNJ15Q99712 375 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 SH3GL3Q99963 347 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 ACOXLQ9NUZ1 547 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 STUB1Q9UNE7 303 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 GSTK1Q9Y2Q3 226 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 LRP12Q9Y561 859 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 R4GMQ9 66 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 PKDREJQ9NTG1 2253 aa12.23□□□□□ -0.45
SMAD9-204ENST00000483941 IQCMA0A1B0GVH7 501 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 TMEM269A0A1B0GVZ9 245 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 RER1O15258 196 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 AIREO43918 545 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 RPP14O95059 124 aaKnown RBP12.22□□□□□ -0.45
SMAD9-204ENST00000483941 WNT11O96014 354 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ITGA5P08648 1049 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 IGHV1-2P23083 117 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 TPTEP56180 551 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ALKBH1Q13686 389 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms