RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 MYLK2Q9H1R3 596 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 WDR76Q9H967 626 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 SRA1Q9HD15 236 aaKnown RBP15.14■□□□□ 0.01
ATG4B-221ENST00000483778 GCM1Q9NP62 436 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 DCAF13Q9NV06 445 aaKnown RBP15.14■□□□□ 0.01
ATG4B-221ENST00000483778 ZNF69Q9UC07 566 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 PPP1R3CQ9UQK1 317 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 PPIAL4AQ9Y536 164 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 IGLV1-36A0A0B4J1U3 117 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 F5H0A9 414 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-221ENST00000483778 TMEM178BH3BS89 294 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 CCDC22O60826 627 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 FOXH1O75593 365 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 PPP1R3DO95685 299 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 TXNDC12O95881 172 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 RAC2P15153 192 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 RHCEP18577 417 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 GATA3P23771 443 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-221ENST00000483778 PMELP40967 661 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 CENPAP49450 140 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 BTG1P62324 171 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 SCGB2A2Q13296 93 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 ZMAT1Q5H9K5 638 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 DPY19L2P2Q6ZN68 376 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 OR6V1Q8N148 313 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 BPIFB2Q8N4F0 458 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 SIGLECL1Q8N7X8 197 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 C3orf56Q8N813 242 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 ATG16L2Q8NAA4 619 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 OR10AD1Q8NGE0 317 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 C1orf147Q96MC9 270 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-221ENST00000483778 ELAC2Q9BQ52 826 aaKnown RBP15.13■□□□□ 0.01
ATG4B-221ENST00000483778 IL19Q9UHD0 177 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 POLR3KQ9Y2Y1 108 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-221ENST00000483778 V9GYQ6 96 aa15.13■□□□□ 0.01
ATG4B-221ENST00000483778 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 PPIAL4CA0A0B4J2A2 164 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 MLNRO43193 412 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 CYB5R3P00387 301 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 PPIAL4FP0DN26 164 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 SELEP16581 610 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 ZNF12P17014 697 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TUBG1P23258 451 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TNFSF4P23510 183 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 CD80P33681 288 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 ZNF154Q13106 437 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TMEM155Q4W5P6 130 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 FAM201AQ5SY85 155 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 FBXW12Q6X9E4 464 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TEX29Q8N6K0 151 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TAF15Q92804 592 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 ZNF48Q96MX3 618 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 ERMAPQ96PL5 475 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 RBM4Q9BWF3 364 aaKnown RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 TUBG2Q9NRH3 451 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 RPS6KA6Q9UK32 745 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 B9D1Q9UPM9 204 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 FAM32AQ9Y421 112 aaKnown RBP15.12■□□□□ 0.01
ATG4B-221ENST00000483778 INSIG2Q9Y5U4 225 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 MGAM2Q2M2H8 2515 aa15.12■□□□□ 0.01
ATG4B-221ENST00000483778 F5H5P2 479 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 WNT2P09544 360 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 TNFRSF1AP19438 455 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 ANOS1P23352 680 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 MMP16P51512 607 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 HOXA4Q00056 320 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-221ENST00000483778 PAX2Q02962 417 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 LINC00346Q8IVM7 164 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 KLHL36Q8N4N3 616 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 BHLHE23Q8NDY6 225 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 OR8G5Q8NG78 346 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 MEGF10Q96KG7 1140 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 NMNAT3Q96T66 252 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 FN3KQ9H479 309 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 TMEM165Q9HC07 324 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 ADA2Q9NZK5 511 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 AURKCQ9UQB9 309 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 AUP1Q9Y679 476 aa15.11■□□□□ 0.01
ATG4B-221ENST00000483778 IGHV3OR16-10A0A075B7F0 116 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 CEACAM18A8MTB9 384 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 SEMG1P04279 462 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 HLA-DPB1P04440 258 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 HIST1H1CP16403 213 aaKnown RBP15.1■□□□□ 0.01
ATG4B-221ENST00000483778 FPR2P25090 351 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 KRTAP27-1Q3LI81 207 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 AWAT1Q58HT5 328 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 SMARCD3Q6STE5 483 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 CFAP77Q6ZQR2 320 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 ADCK1Q86TW2 530 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 JAZF1Q86VZ6 243 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 SPICQ8N5J4 248 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 OR4K13Q8NH42 304 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 JMJD8Q96S16 334 aa15.1■□□□□ 0.01
ATG4B-221ENST00000483778 C5orf63A6NC05 138 aa15.09■□□□□ 0.01
ATG4B-221ENST00000483778 MDH2P40926 338 aaKnown RBP15.09■□□□□ 0.01
ATG4B-221ENST00000483778 RPS6KA3P51812 740 aa15.09■□□□□ 0.01
ATG4B-221ENST00000483778 PAX8Q06710 450 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms