RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SYNPRQ8TBG9 265 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 CPNE4Q96A23 557 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 S100A16Q96FQ6 103 aaKnown RBP11.7□□□□□ -0.54
CPNE1-225ENST00000483495 HES7Q9BYE0 225 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 RNF121Q9H920 327 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 TAS2R4Q9NYW5 299 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 PLA2G3Q9NZ20 509 aa11.7□□□□□ -0.54
CPNE1-225ENST00000483495 P2RY10O00398 339 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 NME2P1O60361 137 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 CYTIPO60759 359 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 GLSO94925 669 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-225ENST00000483495 ITGA5P08648 1049 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 NME2P22392 152 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 HSD11B1P28845 292 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 SLC6A1P30531 599 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 DGCR2P98153 550 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 GPR176Q14439 515 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 SGCAQ16586 387 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 PDSS1Q5T2R2 415 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 PLET1Q6UQ28 207 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 UBE2J2Q8N2K1 259 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 HPS1Q92902 700 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 ZFP3Q96NJ6 502 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 ULBP2Q9BZM5 246 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 PLEKHA1Q9HB21 404 aa11.69□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF275Q9NSD4 429 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-225ENST00000483495 MRPS7Q9Y2R9 242 aaKnown RBP11.69□□□□□ -0.54
CPNE1-225ENST00000483495 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 FAM240BA0A1B0GVZ2 78 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 MEIOCA2RUB1 952 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 OR5H15A6NDH6 313 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 SP1P08047 785 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 NTF4P34130 210 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 PTH2RP49190 550 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 LHX2P50458 406 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF84P51523 738 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 MRPS34P82930 218 aaKnown RBP11.68□□□□□ -0.54
CPNE1-225ENST00000483495 TGIF1Q15583 401 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 RAB11BQ15907 218 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 GLT8D1Q68CQ7 371 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 GJC3Q8NFK1 279 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 ROBO4Q8WZ75 1007 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 SLC25A28Q96A46 364 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 SLC17A5Q9NRA2 495 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 CDV3Q9UKY7 258 aaKnown RBP11.68□□□□□ -0.54
CPNE1-225ENST00000483495 KLF13Q9Y2Y9 288 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-225ENST00000483495 KIAA1549Q9HCM3 1950 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 DOK2O60496 412 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 CD3GP09693 182 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 RRADP55042 308 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 MRPS10P82664 201 aaKnown RBP11.68□□□□□ -0.54
CPNE1-225ENST00000483495 TAF13Q15543 124 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 ATP1A1-AS1Q5TC04 95 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 FAM27BQ5VT28 67 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 SLC25A25Q6KCM7 469 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 AKAP14Q86UN6 197 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 IZUMO1Q8IYV9 350 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 NKAIN3Q8N8D7 197 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 C15orf40Q8WUR7 153 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 MARVELD1Q9BSK0 173 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 RBM24Q9BX46 236 aaKnown RBP11.68□□□□□ -0.54
CPNE1-225ENST00000483495 CACNG2Q9Y698 323 aa11.68□□□□□ -0.54
CPNE1-225ENST00000483495 IGKV3D-15A0A087WSY6 115 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 LOC100289279A0A1B0GTE1 492 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 GABARAPH6UMI1 98 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TNFRSF10AO00220 468 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TFECO14948 347 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-225ENST00000483495 SYT7O43581 403 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 LMX1BO60663 402 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CELA3AP09093 270 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 LIPCP11150 499 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF708P17019 499 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CCL1P22362 96 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CDK2P24941 298 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 BTCP35070 178 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 DDOSTP39656 456 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 NBL1P41271 181 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 POU3F4P49335 361 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CLDN18P56856 261 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF121P58317 390 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CARTPTQ16568 116 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 PLA1AQ53H76 456 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 C1orf100Q5SVJ3 147 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 RIPPLY2Q5TAB7 128 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF529Q6P280 563 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 ANKRD16Q6P6B7 361 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 AAED1Q7RTV5 226 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 PRSS45Q7RTY3 260 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TMEM251Q8N6I4 163 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 PLPP7Q8NBV4 271 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 OR51D1Q8NGF3 324 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms