RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MPDZO75970 2070 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 CSTBP04080 98 aaKnown RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 LYL1P12980 280 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ALOX5APP20292 161 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 S100A2P29034 98 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 CYCSP99999 105 aaKnown RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 DPTQ07507 201 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RASGEF1BQ0VAM2 473 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RUNX2Q13950 521 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 SLC9A3R2Q15599 337 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 HMGN3Q15651 99 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ACTBL2Q562R1 376 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TMEM225Q6GV28 225 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF574Q6ZN55 896 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 BEND4Q6ZU67 534 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TMEFF1Q8IYR6 380 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RAB42Q8N4Z0 105 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 MFSD9Q8NBP5 474 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RCBTB1Q8NDN9 531 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 OR2L3Q8NG85 312 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 OR10D4PQ8NGN7 298 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 COX14Q96I36 57 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TGM7Q96PF1 710 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 CDC6Q99741 560 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 KXD1Q9BQD3 176 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TGIF2Q9GZN2 237 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 PPP4R1LQ9P1A2 415 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 POMT1Q9Y6A1 747 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 USP34Q70CQ2 3546 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ALPK2Q86TB3 2170 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 PMP2P02689 132 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SOD2P04179 222 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 PCCBP05166 539 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 CT62P0C5K7 136 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 RAB32Q13637 225 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 GAMTQ14353 236 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SHHQ15465 462 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SSX2Q16385 188 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 ULK3Q6PHR2 472 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 RNF44Q7L0R7 432 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 VN1R4Q7Z5H5 301 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 ADGRE4PQ86SQ3 457 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 RTN4RL2Q86UN3 420 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 CDRT4Q8N9R6 151 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 CPNE4Q96A23 557 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 NUDT9Q9BW91 350 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SCRT1Q9BWW7 348 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 LMAN2LQ9H0V9 348 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 GAR1Q9NY12 217 aaKnown RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF860A6NHJ4 632 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 LDLRAD4O15165 306 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 PNPP00491 289 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 F13BP05160 661 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 HIST1H1BP16401 226 aaKnown RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 TSFMP43897 325 aaKnown RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SLC25A1P53007 311 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SURF2Q15527 256 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-205ENST00000483122 TTLL10Q6ZVT0 673 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 OR2L8Q8NGY9 312 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 AQP3Q92482 292 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 OR10C1Q96KK4 312 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 FOXN4Q96NZ1 517 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 SPHK2Q9NRA0 654 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 PARPBPQ9NWS1 579 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 DOK5Q9P104 306 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 HEATR5AQ86XA9 2040 aa10.59□□□□□ -0.71
VTI1A-205ENST00000483122 TBC1D3DA0A087WVF3 549 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TBC1D3IA0A087WXS9 549 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TBC1D3LB9A6J9 549 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 IGKV1D-16P01601 117 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 MPZP25189 248 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 CTXN1P60606 82 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 RPS4XP62701 263 aaKnown RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 GUK1Q16774 197 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 ISXQ2M1V0 245 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF260Q3ZCT1 412 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 DEFB134Q4QY38 66 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 MIDNQ504T8 468 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 OR2A2Q6IF42 318 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TBC1D3CQ6IPX1 549 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 TBC1D3Q8IZP1 549 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 CSNK1A1LQ8N752 337 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SEMA6DQ8NFY4 1073 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 OR4N2Q8NGD1 307 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 OR52E1Q8NGJ3 308 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 OR8D1Q8WZ84 308 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 STACQ99469 402 aa10.58□□□□□ -0.72
VTI1A-205ENST00000483122 SSX3Q99909 188 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms