RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TBC1D28Q2M2D7 210 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 OGFRL1Q5TC84 451 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 FAM131AQ6UXB0 335 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 SLC47A2Q86VL8 602 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 PGBD5Q8N414 524 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 DHRSXQ8N5I4 330 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 UBL4BQ8N7F7 174 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 ATP6V0D2Q8N8Y2 350 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 PRELID2Q8N945 189 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 WDR31Q8NA23 367 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 C9orf106Q8NAJ2 232 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 TMEM161BQ8NDZ6 487 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 OR2T11Q8NH01 316 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 SLC7A13Q8TCU3 470 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 RASL10AQ92737 203 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 DLX4Q92988 240 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 RERGQ96A58 199 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 SMIM19Q96E16 107 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 CPNE2Q96FN4 548 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 ZNF285Q96NJ3 590 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 ZNF599Q96NL3 588 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 OXGR1Q96P68 337 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 P2RX4Q99571 388 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 C12orf57Q99622 126 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 PHB2Q99623 299 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 TUBB1Q9H4B7 451 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 CLMPQ9H6B4 373 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 METTL17Q9H7H0 456 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 WFDC1Q9HC57 220 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 GSKIPQ9P0R6 139 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 PRODH2Q9UF12 536 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 DKKL1Q9UK85 242 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 PILRBQ9UKJ0 227 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 SAMD4AQ9UPU9 718 aaKnown RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 OR51B4Q9Y5P0 310 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 R4GN57 208 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 CNTNAP1P78357 1384 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 C9orf84Q5VXU9 1444 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 MTCL1Q9Y4B5 1905 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 TRBV5-5A0A0J9YX44 114 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 OR5K3A6NET4 321 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CCDC182A6NF36 153 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SEC14L6B5MCN3 397 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 H3BMQ9 156 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 CDIPTO14735 213 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 PFDN6O15212 129 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 PHF1O43189 567 aaPredicted RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 CST8O60676 142 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 EIF1BO60739 113 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 ENTPD6O75354 484 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CLDN11O75508 207 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 TTC4O95801 387 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CST2P09228 141 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ACSM4P0C7M7 580 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 AKR1C4P17516 323 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ARR3P36575 388 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 VHLP40337 213 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 EIF1P41567 113 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 GABRA4P48169 554 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 GSK3BP49841 420 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 PDLIM4P50479 330 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 STC1P52823 247 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 VSX2P58304 361 aaPredicted RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 DCDC1P59894 354 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SEC61A1P61619 476 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 ESRRGP62508 458 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CD300CQ08708 224 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 MAPK14Q16539 360 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CALCRLQ16602 461 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 C4orf26Q17RF5 130 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ZFP1Q6P2D0 407 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 FAM199XQ6PEV8 388 aaPredicted RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 STOX1Q6ZVD7 989 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 TMEM135Q86UB9 458 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SMIM20Q8N5G0 67 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ARRDC1Q8N5I2 433 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 HSD17B11Q8NBQ5 300 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 OR10G3Q8NGC4 313 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 ZPLD1Q8TCW7 415 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 HAVCR2Q8TDQ0 301 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CRYGNQ8WXF5 182 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 TOMM40LQ969M1 308 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 PNPLA2Q96AD5 504 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 EXOSC8Q96B26 276 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 SFRP2Q96HF1 295 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CAPNS2Q96L46 248 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 Q96MT0 163 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 COL21A1Q96P44 957 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 OR5B12Q96R08 314 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 PFDN5Q99471 154 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 CDCA3Q99618 268 aaPredicted RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 CHIAQ9BZP6 476 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SHARPINQ9H0F6 387 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 DDX31Q9H8H2 851 aaKnown RBP3.47□□□□□ -1.85
VPS41-212ENST00000482217 S100A14Q9HCY8 104 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 B3GNT2Q9NY97 397 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 VAPAQ9P0L0 249 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 MUTYHQ9UIF7 546 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 BTNL2Q9UIR0 455 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms