RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 FAHD1Q6P587 224 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 TMEM154Q6P9G4 183 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 HIPK1Q86Z02 1210 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 ATF6BQ99941 703 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 HINT3Q9NQE9 182 aaKnown RBP17.79■□□□□ 0.44
NELFE-208ENST00000481121 TANC2Q9HCD6 1990 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 CSPG4Q6UVK1 2322 aa17.79■□□□□ 0.44
NELFE-208ENST00000481121 PLSCR5A0PG75 271 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 C17orf100A8MU93 164 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 G3V2T6 193 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 ZNF23P17027 643 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 RPS27P42677 84 aaKnown RBP17.78■□□□□ 0.44
NELFE-208ENST00000481121 RGS6P49758 472 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 ACSM5Q6NUN0 579 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 UBASH3BQ8TF42 649 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 LRTOMTQ8WZ04 291 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 COG8Q96MW5 612 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 TEX12Q9BXU0 123 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 MED20Q9H944 212 aa17.78■□□□□ 0.44
NELFE-208ENST00000481121 A0A096LNT2 108 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 J3QW42 95 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 SPARCP09486 303 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 TUBG1P23258 451 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 DAPP51397 102 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 BLVRAP53004 296 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 CDK5Q00535 292 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 AMIGO2Q86SJ2 522 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 ZDHHC13Q8IUH4 622 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 ZNF786Q8N393 782 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 MAP6Q96JE9 813 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 HCAR1Q9BXC0 346 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 WDR76Q9H967 626 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 SLC25A19Q9HC21 320 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 TUBG2Q9NRH3 451 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 CGGBP1Q9UFW8 167 aaPredicted RBP17.77■□□□□ 0.44
NELFE-208ENST00000481121 ABCA1O95477 2261 aa17.77■□□□□ 0.44
NELFE-208ENST00000481121 VWC2LB2RUY7 222 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 SURF4O15260 269 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 HPXP02790 462 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 HMGN1P05114 100 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 NR4A2P43354 598 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 MAGEB1P43366 347 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 ENTPD1P49961 510 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 LOXL1Q08397 574 aaPredicted RBP17.77■□□□□ 0.43
NELFE-208ENST00000481121 ECH1Q13011 328 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 PCGF3Q3KNV8 242 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 TMEM255AQ5JRV8 349 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 PARP8Q8N3A8 854 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 ZNF511Q8NB15 262 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 PLEKHA8Q96JA3 519 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 POFUT1Q9H488 388 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 PNRC2Q9NPJ4 139 aaKnown RBP17.77■□□□□ 0.43
NELFE-208ENST00000481121 KRT84Q9NSB2 600 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 STARD10Q9Y365 291 aa17.77■□□□□ 0.43
NELFE-208ENST00000481121 PRR23D1E9PI22 279 aaPredicted RBP17.76■□□□□ 0.43
NELFE-208ENST00000481121 TIMM8AO60220 97 aaPredicted RBP17.76■□□□□ 0.43
NELFE-208ENST00000481121 NCR1O76036 304 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 PRR23D2P0DMB1 279 aaPredicted RBP17.76■□□□□ 0.43
NELFE-208ENST00000481121 ZNF81P51508 661 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 MMP15P51511 669 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 ACTR3P61158 418 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 GGTLC2Q14390 218 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 LINC01590Q5TEZ4 76 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 TMEM236Q5W0B7 351 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 DCXRQ7Z4W1 244 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 ZNF540Q8NDQ6 660 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 PYDC1Q8WXC3 89 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 GTF3AQ92664 365 aaKnown RBP17.76■□□□□ 0.43
NELFE-208ENST00000481121 APOBEC3DQ96AK3 386 aaPredicted RBP17.76■□□□□ 0.43
NELFE-208ENST00000481121 BPESC1Q9GZL8 116 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 GABARAPL1Q9H0R8 117 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 CYSLTR2Q9NS75 346 aa17.76■□□□□ 0.43
NELFE-208ENST00000481121 HIVEP2P31629 2446 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 F5H5K5 113 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 LYNX1G3V0Z9 82 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 LYNX1P0DP58 116 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 PSKH1P11801 424 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 USF1P22415 310 aaPredicted RBP17.75■□□□□ 0.43
NELFE-208ENST00000481121 GIFP27352 417 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 LIPAP38571 399 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 CRISP1P54107 249 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 KPNB1Q14974 876 aaKnown RBP17.75■□□□□ 0.43
NELFE-208ENST00000481121 ZMAT1Q5H9K5 638 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 PLBD1Q6P4A8 553 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 OR5L1Q8NGL2 311 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 OR51V1Q9H2C8 321 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 SEMA6AQ9H2E6 1030 aa17.75■□□□□ 0.43
NELFE-208ENST00000481121 TPD52L2O43399 206 aaKnown RBP17.74■□□□□ 0.43
NELFE-208ENST00000481121 GLCEO94923 617 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 RIPPLY3P57055 190 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 CCL8P80075 99 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 KRTAP1-1Q07627 177 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 PSG7Q13046 419 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 KRTAP27-1Q3LI81 207 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 ERI1Q8IV48 349 aaKnown RBP17.74■□□□□ 0.43
NELFE-208ENST00000481121 OR10S1Q8NGN2 331 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 RDH5Q92781 318 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 CENPNQ96H22 339 aaPredicted RBP17.74■□□□□ 0.43
NELFE-208ENST00000481121 INTS14Q96SY0 518 aa17.74■□□□□ 0.43
NELFE-208ENST00000481121 DDX28Q9NUL7 540 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms