RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 APOBEC1P41238 236 aaKnown RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 CASP6P55212 293 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 OR10A3P58181 314 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 FOXF1Q12946 379 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 TMEM185AQ8NFB2 350 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 DEFB126Q9BYW3 111 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 ARRDC1-AS1Q9H2J1 176 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 TXNIPQ9H3M7 391 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 ZNF729A6NN14 1252 aaPredicted RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 OR2T1O43869 369 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 GPANK1O95872 356 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 ZNF883P0CG24 379 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 RIDAP52758 137 aaKnown RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 NANOS3P60323 173 aaKnown RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 OC90Q02509 493 aaPredicted RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 ZNF660Q6AZW8 331 aaPredicted RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 TPRA1Q86W33 373 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 SPAG16Q8N0X2 631 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 PDCD1LG2Q9BQ51 273 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 OR10A4Q9H209 315 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 PIPOXQ9P0Z9 390 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 PTRH2Q9Y3E5 179 aaKnown RBP15.04■□□□□ -0
SH3D21-203ENST00000480549 WIF1Q9Y5W5 379 aa15.04■□□□□ -0
SH3D21-203ENST00000480549 COX6A1P12074 109 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 B3GNTL1Q67FW5 361 aaPredicted RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 NHLRC1Q6VVB1 395 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 BTN2A1Q7KYR7 527 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 SPACA9Q96E40 222 aaPredicted RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 IMMP1LQ96LU5 166 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 ZNF700Q9H0M5 742 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 WDR76Q9H967 626 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 CHMP1AQ9HD42 196 aaPredicted RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 PPP4R1LQ9P1A2 415 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 MRM2Q9UI43 246 aaKnown RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 PRSS37A4D1T9 235 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 METTL21EPA6NDL7 271 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 PSMA6P60900 246 aaKnown RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 SEC61A1P61619 476 aaKnown RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 NAA40Q86UY6 237 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 SVBPQ8N300 66 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 ACOT12Q8WYK0 555 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 VSX1Q9NZR4 365 aaPredicted RBP15.03■□□□□ -0
SH3D21-203ENST00000480549 EML6Q6ZMW3 1958 aa15.03■□□□□ -0
SH3D21-203ENST00000480549 RALGAPA1Q6GYQ0 2036 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 SHISA8B8ZZ34 492 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 XKRYO14609 159 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 EFNA2O43921 213 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 ABHD16AO95870 558 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 CALCRP30988 508 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 CCKBRP32239 447 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 VEGFCP49767 419 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 INSM1Q01101 510 aaPredicted RBP15.02■□□□□ -0
SH3D21-203ENST00000480549 PDZK1IP1Q13113 114 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 SLC25A53Q5H9E4 307 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 SFXN4Q6P4A7 337 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 C20orf85Q9H1P6 137 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 ZNF69Q9UC07 566 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 HS3ST3B1Q9Y662 390 aa15.02■□□□□ -0
SH3D21-203ENST00000480549 ARGFXA6NJG6 315 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 ZNF208O43345 1280 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 UPK3AO75631 287 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 HLA-DOBP13765 273 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 NDUFB7P17568 137 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 MSX1P28360 303 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 RAB5BP61020 215 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 INPP5JQ15735 1006 aaPredicted RBP15.02□□□□□ -0.01
SH3D21-203ENST00000480549 OR56B4Q8NH76 319 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 RHOVQ96L33 236 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 ADAD1Q96M93 576 aaKnown RBP15.02□□□□□ -0.01
SH3D21-203ENST00000480549 TMEM68Q96MH6 324 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 METTL7AQ9H8H3 244 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 B9D1Q9UPM9 204 aa15.02□□□□□ -0.01
SH3D21-203ENST00000480549 TRAV1-2A0A0B4J238 106 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 A0A1B0GW55 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 MEX3AA1L020 520 aaKnown RBP15.01□□□□□ -0.01
SH3D21-203ENST00000480549 MS4A18H0YCH9 400 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 UCHL1P09936 223 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L2P0CJ85 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L3P0CJ86 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L4P0CJ87 422 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L5P0CJ88 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L6P0CJ89 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4L7P0CJ90 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 OR8G3PP0DMU2 310 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 POU3F4P49335 361 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DGCR2P98153 550 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 PLPPR5Q32ZL2 321 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 MS4A18Q3C1V0 323 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 UNQ9370/PRO34162Q6UXP9 181 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 MFSD8Q8NHS3 518 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 POC1BQ8TC44 478 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 CYSLTR2Q9NS75 346 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 DUX4Q9UBX2 424 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 C9J4A7 227 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 OR6A2O95222 327 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 NUBP1P53384 320 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 SNTB2Q13425 540 aaKnown RBP15.01□□□□□ -0.01
SH3D21-203ENST00000480549 OR2Y1Q8NGV0 311 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 OR6N2Q8NGY6 317 aa15.01□□□□□ -0.01
SH3D21-203ENST00000480549 RHBDD1Q8TEB9 315 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms