RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 EGR3Q06889 387 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 PMPCAQ10713 525 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 EEF1A1P5Q5VTE0 462 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 ATG4DQ86TL0 474 aaPredicted RBP11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 ACBD4Q8NC06 268 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 OTOSQ8NHW6 89 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 KLHDC7BQ96G42 594 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 CMKLR1Q99788 373 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 OR8D2Q9GZM6 311 aa11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF629Q9UEG4 869 aaPredicted RBP11.94□□□□□ -0.5
PDZRN3-208ENST00000479530 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 LMX1BO60663 402 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CRYBA1P05813 215 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 RFC3P40938 356 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 GABRA4P48169 554 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 SKP1P63208 163 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CXADRP78310 365 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 SPOCK1Q08629 439 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CCDC36Q8IYA8 594 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ASB5Q8WWX0 329 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CYYR1Q96J86 154 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ADOQ96SZ5 270 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 G6PC3Q9BUM1 346 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 SOHLH2Q9NX45 425 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 MEX3AA1L020 520 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 C11orf98E9PRG8 122 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CLDN4O14493 209 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CD74P04233 296 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 MYF5P13349 255 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CD1CP29017 333 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 MEOX2P50222 304 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ELOCQ15369 112 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CDNFQ49AH0 187 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 CCDC157Q569K6 752 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 PAPD4Q6PIY7 484 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ARMC10Q8N2F6 343 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 LMX1AQ8TE12 382 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 TMED6Q8WW62 240 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 ROBO4Q8WZ75 1007 aa11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 RRNAD1Q96FB5 475 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 DHCR7Q9UBM7 475 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-208ENST00000479530 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 YKT6O15498 198 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 FGF16O43320 207 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 VAMP1P23763 118 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 IL13RA1P78552 427 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC17A1Q14916 467 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 MICBQ29980 383 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 DEFB133Q30KQ1 61 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 FNDC7Q5VTL7 733 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 LYG2Q86SG7 212 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 RXFP4Q8TDU9 374 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 TAAR8Q969N4 342 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 PIK3IP1Q96FE7 263 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 CPNE2Q96FN4 548 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 OR8B4Q96RC9 309 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 MESP1Q9BRJ9 268 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC19A3Q9BZV2 496 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 FN3KRPQ9HA64 309 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 MYOZ1Q9NP98 299 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 CYB5R1Q9UHQ9 305 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 DHDHQ9UQ10 334 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 A0A0B4J2A0 478 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 A0A1W2PPC4 97 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 NSA2O95478 260 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 AKR1C4P17516 323 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SKP2Q13309 424 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 FAM209BQ5JX69 171 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC25A42Q86VD7 318 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 ELP5Q8TE02 316 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 GLYATL2Q8WU03 294 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 PRMT8Q9NR22 394 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC17A5Q9NRA2 495 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 GPR27Q9NS67 375 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 RP1P56715 2156 aa11.92□□□□□ -0.5
PDZRN3-208ENST00000479530 C13orf42A0A1B0GVH6 325 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF208O43345 1280 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 UTS2O95399 124 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 TXNDC12O95881 172 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 SPARCP09486 303 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 APEHP13798 732 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC37A1P57057 533 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 TTLL10Q6ZVT0 673 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 OR10R2Q8NGX6 335 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms