RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 SLC7A6Q92536 515 aa19.88■□□□□ 0.77
C9orf3-215ENST00000478473 EGLN3Q9H6Z9 239 aa19.88■□□□□ 0.77
C9orf3-215ENST00000478473 RPRD1BQ9NQG5 326 aaKnown RBP19.88■□□□□ 0.77
C9orf3-215ENST00000478473 CYB5R1Q9UHQ9 305 aa19.88■□□□□ 0.77
C9orf3-215ENST00000478473 KCNG2Q9UJ96 466 aa19.88■□□□□ 0.77
C9orf3-215ENST00000478473 GRIP1Q9Y3R0 1128 aa19.88■□□□□ 0.77
C9orf3-215ENST00000478473 SPRY3O43610 288 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 CCNB2O95067 398 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 HOXB6P17509 224 aaKnown RBP19.87■□□□□ 0.77
C9orf3-215ENST00000478473 HNF1AP20823 631 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 PCMT1P22061 227 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 TSTQ16762 297 aaKnown RBP19.87■□□□□ 0.77
C9orf3-215ENST00000478473 MEP1BQ16820 701 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 MICAQ29983 383 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 HFEQ30201 348 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 CD300LDQ6UXZ3 194 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 SDR9C7Q8NEX9 313 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 OR52L1Q8NGH7 329 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 OR52E2Q8NGJ4 325 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 OR8D4Q8NGM9 314 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 SPATA3Q8NHX4 192 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 CMBLQ96DG6 245 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 PLA2G12AQ9BZM1 189 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 EGLN1Q9GZT9 426 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 VNN3Q9NY84 501 aa19.87■□□□□ 0.77
C9orf3-215ENST00000478473 CLDN25C9JDP6 229 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 DBHP09172 617 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 RAP2AP10114 183 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 SRD5A1P18405 259 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 ECH1Q13011 328 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 CCNIQ14094 377 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 APOBEC3DQ96AK3 386 aaPredicted RBP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 REEP1Q9H902 201 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 MSL2Q9HCI7 577 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 PNRC2Q9NPJ4 139 aaKnown RBP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 MRPL22Q9NWU5 206 aaKnown RBP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 TMEFF2Q9UIK5 374 aaPredicted RBP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 BAIAP2Q9UQB8 552 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 POLR1DQ9Y2S0 133 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 SAMHD1Q9Y3Z3 626 aaKnown RBP19.86■□□□□ 0.77
C9orf3-215ENST00000478473 WIPI2Q9Y4P8 454 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 CACNG2Q9Y698 323 aa19.86■□□□□ 0.77
C9orf3-215ENST00000478473 ARRDC5A6NEK1 342 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 AQP12BA6NM10 295 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 FAM157AC9JC47 383 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 TIMM8AO60220 97 aaPredicted RBP19.85■□□□□ 0.77
C9orf3-215ENST00000478473 DEAF1O75398 565 aaPredicted RBP19.85■□□□□ 0.77
C9orf3-215ENST00000478473 SLC3A1Q07837 685 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 Q6ZR03 302 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 TRPM8Q7Z2W7 1104 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 AQP12AQ8IXF9 295 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 AQP11Q8NBQ7 271 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 OR5L1Q8NGL2 311 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 TREM2Q9NZC2 230 aa19.85■□□□□ 0.77
C9orf3-215ENST00000478473 TANC2Q9HCD6 1990 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 A0A1B0GWJ7 208 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 TPD52L2O43399 206 aaKnown RBP19.84■□□□□ 0.77
C9orf3-215ENST00000478473 MSMBP08118 114 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 CENPAP49450 140 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 CLEC12AQ5QGZ9 265 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 SLC35F1Q5T1Q4 408 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 CORO6Q6QEF8 472 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 CFAP77Q6ZQR2 320 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 ADGRG5Q8IZF4 528 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 OR2T4Q8NH00 348 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 RAB1CQ92928 201 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 TMEM186Q96B77 213 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 CLPTM1LQ96KA5 538 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 RBM4Q9BWF3 364 aaKnown RBP19.84■□□□□ 0.77
C9orf3-215ENST00000478473 C1QTNF5Q9BXJ0 243 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 NMNAT2Q9BZQ4 307 aa19.84■□□□□ 0.77
C9orf3-215ENST00000478473 DBPQ10586 325 aaPredicted RBP19.83■□□□□ 0.77
C9orf3-215ENST00000478473 PPP1R8Q12972 351 aaKnown RBP19.83■□□□□ 0.77
C9orf3-215ENST00000478473 PCK2Q16822 640 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 SPRNQ5BIV9 151 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 GLCCI1Q86VQ1 547 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 TIMD4Q96H15 378 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 CHID1Q9BWS9 393 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 FN3KQ9H479 309 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 IL19Q9UHD0 177 aa19.83■□□□□ 0.77
C9orf3-215ENST00000478473 IGHV2-5P01817 119 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 ACSM4P0C7M7 580 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 ANPEPP15144 967 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 OTX1P32242 354 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-215ENST00000478473 SLC25A1P53007 311 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 TNFAIP6P98066 277 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-215ENST00000478473 MVKQ03426 396 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 ZNF283Q8N7M2 679 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 SLC37A3Q8NCC5 494 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 OR51F2Q8NH61 342 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 CCL17Q92583 94 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 CCDC124Q96CT7 223 aaKnown RBP19.82■□□□□ 0.76
C9orf3-215ENST00000478473 RAB39BQ96DA2 213 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 MAP6Q96JE9 813 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 LRGUKQ96M69 825 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 ATF6BQ99941 703 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 THTPAQ9BU02 230 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 TSSK6Q9BXA6 273 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 NARFLQ9H6Q4 476 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms