RNA–Protein interactions for RNA: ENST00000476648.5

SNX5-209, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-209ENST00000476648 GPA33Q99795 319 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 C11orf70Q9BRQ4 267 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 TMEM246Q9BRR3 403 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 TCHPQ9BT92 498 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 OSBPL11Q9BXB4 747 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 ANKRD60Q9BZ19 345 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 ROGDIQ9GZN7 287 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 POLR1EQ9GZS1 481 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 RPF2Q9H7B2 306 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 LIN28AQ9H9Z2 209 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 POPDC2Q9HBU9 364 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 MRPL47Q9HD33 250 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 XPNPEP1Q9NQW7 623 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 SLC17A5Q9NRA2 495 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 GID8Q9NWU2 228 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 GIN1Q9NXP7 522 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 QPCTLQ9NXS2 382 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 EPS15L1Q9UBC2 864 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 PTBP2Q9UKA9 531 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 ZNF835Q9Y2P0 537 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 IKBKGQ9Y6K9 419 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 DDX60LQ5H9U9 1706 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 SHANK3Q9BYB0 1731 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 BAZ2BQ9UIF8 2168 aaKnown RBP1.9□□□□□ -2.11
SNX5-209ENST00000476648 CCDC88AQ3V6T2 1871 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 LAMB2P55268 1798 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 ANKRD36CQ5JPF3 1778 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 RGPD5Q99666 1765 aa1.9□□□□□ -2.11
SNX5-209ENST00000476648 COL24A1Q17RW2 1714 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 KIR2DL5BA0A0G2JN68 375 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 KIR2DL5BA0A0G2JPC4 375 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 LOC100653049A0A140TA62 436 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 TCRBV3S1A0A5B6 114 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 RGSL1A5PLK6 1076 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ARHGEF35A5YM69 484 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 GOLGA8IPA6NC78 632 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 GOLGA8JA6NMD2 632 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 TMEM114B3SHH9 223 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 F8VP50 259 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 APOC4-APOC2K7ER74 178 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 KPNA4O00629 521 aaPredicted RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 XPO1O14980 1071 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 LSM1O15116 133 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 PFDN6O15212 129 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 AQP9O43315 295 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CHMP2AO43633 222 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 UGT1A9O60656 530 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 PLIN3O60664 434 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CST8O60676 142 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ZMPSTE24O75844 475 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 KRT34O76011 436 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 VAPBO95292 243 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 LYPLA2O95372 231 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 LSM8O95777 96 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 APOEP02649 317 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 APOC2P02655 101 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CALB1P05937 261 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 KRT7P08729 469 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ZNF286BP0CG31 522 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ME2P23368 584 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 FMO3P31513 532 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CXCL5P42830 114 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 MAGEA3P43357 314 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 MAGEA12P43365 314 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ARRB1P49407 418 aaPredicted RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 EIF2B2P49770 351 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 NUDT2P50583 147 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 C21orf59P57076 290 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ATP6V0D1P61421 351 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 YWHAGP61981 247 aaKnown RBP eCLIP1.89□□□□□ -2.11
SNX5-209ENST00000476648 ESRRGP62508 458 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 RPL10AP62906 217 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 BASP1P80723 227 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 MRPS22P82650 360 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 OGDHQ02218 1023 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 REG3AQ06141 175 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CYP24A1Q07973 514 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 NAB1Q13506 487 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CUL2Q13617 745 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 FLOT2Q14254 428 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 PIGHQ14442 188 aaPredicted RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 CYTH1Q15438 398 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ATP6AP1Q15904 470 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 INAQ16352 499 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 SNRNP35Q16560 246 aaKnown RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 RGS21Q2M5E4 152 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 CEP55Q53EZ4 464 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 C5orf47Q569G3 176 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 N4BP2L1Q5TBK1 243 aaPredicted RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 STEAP4Q687X5 459 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 TPGS2Q68CL5 300 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 SPOPLQ6IQ16 392 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ANKRD26P1Q6NSI1 321 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 NANOGP8Q6NSW7 305 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 DNAJC24Q6P3W2 148 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 EPGNQ6UW88 154 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 ZCCHC23Q6ZST2 131 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 NANOGNBQ7Z5D8 188 aa1.89□□□□□ -2.11
SNX5-209ENST00000476648 SETD3Q86TU7 594 aaPredicted RBP1.89□□□□□ -2.11
SNX5-209ENST00000476648 CLVS1Q8IUQ0 354 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms