RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 IGFBP3P17936 291 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 CHMLP26374 656 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 GPX6P59796 221 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 KRTAP10-1P60331 282 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 ACTR3P61158 418 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 YWHAGP61981 247 aaKnown RBP eCLIP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 ECH1Q13011 328 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 UBE2SQ16763 222 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 FAM83EQ2M2I3 478 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 FAM92BQ6ZTR7 304 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 NCCRP1Q6ZVX7 275 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 ABHD13Q7L211 337 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 H1FOOQ8IZA3 346 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 EID2Q8N6I1 236 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 OR10G4Q8NGN3 311 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 OR2L8Q8NGY9 312 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 RHEBL1Q8TAI7 183 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 CXorf40AQ8TE69 158 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 PIBF1Q8WXW3 757 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 WFIKKN1Q96NZ8 548 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 MRPL37Q9BZE1 423 aaKnown RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 ETNK2Q9NVF9 386 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 NUP50Q9UKX7 468 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 MRPS18BQ9Y676 258 aaKnown RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-211ENST00000476215 SYNJ2BP-COX16A0A087WUM0 186 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 H0YHG0 523 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 UTS2O95399 124 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 CTDNEP1O95476 244 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 CST1P01037 141 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 FABP3P05413 133 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 RETP07949 1114 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 FOLR1P15328 257 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 TNNI1P19237 187 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 HRH1P35367 487 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 PRMT2P55345 433 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 NUTF2P61970 127 aaKnown RBP2.93□□□□□ -1.94
PTCD3-211ENST00000476215 ACTA2P62736 377 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 ACTG2P63267 376 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 ACTC1P68032 377 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 CLINT1Q14677 625 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 SSX2Q16385 188 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 ZSCAN26Q16670 478 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 VAX1Q5SQQ9 334 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF836Q6ZNA1 936 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 NANOGNBQ7Z5D8 188 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 OAFQ86UD1 273 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 MS4A15Q8N5U1 240 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 SPATA4Q8NEY3 305 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 FAM3DQ96BQ1 224 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 PIK3IP1Q96FE7 263 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 OR2A5Q96R48 311 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 SLC2A8Q9NY64 477 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 PSMC3IPQ9P2W1 217 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-211ENST00000476215 DNAH12Q6ZR08 3092 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 SPEF2Q9C093 1822 aa2.93□□□□□ -1.94
PTCD3-211ENST00000476215 IGHV5-51A0A0C4DH38 117 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 H0Y8G0 127 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 NDUFB10O96000 172 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 GNAO1P09471 354 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 CCL5P13501 91 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 PGAM1P18669 254 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 SULT1E1P49888 294 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 GINS1Q14691 196 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 POU2AF1Q16633 256 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 NIPA1Q7RTP0 329 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 ABHD12BQ7Z5M8 362 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF695Q8IW36 515 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 ITPRIPQ8IWB1 547 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 PGAM4Q8N0Y7 254 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 PDIK1LQ8N165 341 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 OR1S2Q8NGQ3 325 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 OR5W2Q8NH69 310 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 OR4S2Q8NH73 311 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 NDFIP1Q9BT67 221 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 CWH43Q9H720 699 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF629Q9UEG4 869 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-211ENST00000476215 PISDQ9UG56 409 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF222Q9UK12 451 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 LAMA2P24043 3122 aaKnown RBP2.92□□□□□ -1.94
PTCD3-211ENST00000476215 TRIOBPQ9H2D6 2365 aa2.92□□□□□ -1.94
PTCD3-211ENST00000476215 LAMA3Q16787 3333 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 A0A1W2PP18 115 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 GABARAPO95166 117 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 AIFM1O95831 613 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 CDKN2BP42772 138 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 ATP5IP56385 69 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-211ENST00000476215 RAP1AP62834 184 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 DYNLL1P63167 89 aaKnown RBP2.91□□□□□ -1.94
PTCD3-211ENST00000476215 HMGN5P82970 282 aaKnown RBP2.91□□□□□ -1.94
PTCD3-211ENST00000476215 ERCC8Q13216 396 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 VPS26BQ4G0F5 336 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 ANKRD26P1Q6NSI1 321 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 TMEM107Q6UX40 140 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 B3GNT7Q8NFL0 401 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 KCNG3Q8TAE7 436 aa2.91□□□□□ -1.94
PTCD3-211ENST00000476215 LKAAEAR1Q8TD35 194 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms