RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 TVP23CQ96ET8 276 aa1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 SHANK2-AS3Q9BTD1 123 aa1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 RSG1Q9BU20 258 aa1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 GCOM2Q9BZD3 368 aaPredicted RBP1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 EXOSC4Q9NPD3 245 aaKnown RBP1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 PSMC3IPQ9P2W1 217 aaPredicted RBP1.78□□□□□ -2.12
SEC23IP-206ENST00000475542 PALLDQ8WX93 1383 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 TRAV6A0A075B6T7 132 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 IGKV1-8A0A0C4DH67 115 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 A0A1W2PNN7 141 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 SMCO2A6NFE2 343 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 GABRR3A8MPY1 467 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 H7C417 338 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 SERPINA3P01011 423 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 ERGP11308 486 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 TNNI1P19237 187 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 RPS11P62280 158 aaKnown RBP eCLIP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 RPL23AP62750 156 aaKnown RBP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 RPL23P62829 140 aaKnown RBP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 CCNA1P78396 465 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 PRAMEF5Q5TYX0 476 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 PRAMEF6Q5VXH4 476 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 ADNP2Q6IQ32 1131 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 GUSBP11Q6P575 273 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 MBOAT1Q6ZNC8 495 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 TMEM150AQ86TG1 271 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 UBE2J2Q8N2K1 259 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 NPWQ8N729 165 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 SPANXA2-OT1Q8N9U9 137 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 C1orf64Q8NEQ6 169 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 RSPH1Q8WYR4 309 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 EEF1AKMT3Q96AZ1 226 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 WDR34Q96EX3 536 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 DNAJC1Q96KC8 554 aaKnown RBP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 CDX2Q99626 313 aaPredicted RBP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 FRMD8P1Q9BZ68 369 aaPredicted RBP1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 OR51M1Q9H341 326 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 MTFP1Q9UDX5 166 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 PISDQ9UG56 409 aa1.77□□□□□ -2.13
SEC23IP-206ENST00000475542 IGHV7-4-1A0A0J9YVY3 117 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 KRBOX1C9JBD0 128 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 NDUFC2-KCTD14E9PQ53 114 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 FKBP6O75344 327 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 SEMA3DO95025 777 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 NDUFB10O96000 172 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 NCF2P19878 526 aaPredicted RBP1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 NAA10P41227 235 aaPredicted RBP1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 GFERP55789 205 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 SYNJ2BPP57105 145 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 RPS23P62266 143 aaKnown RBP1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 RBMY1FQ15415 496 aaKnown RBP1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 SOHLH1Q5JUK2 328 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 PPM1LQ5SGD2 360 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 RNASEKQ6P5S7 137 aaKnown RBP1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 CASP12Q6UXS9 341 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 ZNF101Q8IZC7 436 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 C11orf72Q8NBR9 251 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 OR11H7Q8NGC8 314 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 NT5C3BQ969T7 300 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 RHOXF2Q9BQY4 288 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 SIGLEC7Q9Y286 467 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 ANKRD12Q6UB98 2062 aa1.76□□□□□ -2.13
SEC23IP-206ENST00000475542 DENND4AQ7Z401 1863 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 SCN4AP35499 1836 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 USP47Q96K76 1375 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 OR5H1A6NKK0 313 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CXCL11O14625 94 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CDC40O60508 579 aaKnown RBP eCLIP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CYB5R3P00387 301 aaPredicted RBP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 U2AF2P26368 475 aaKnown RBP eCLIP1.75□□□□□ -2.134e-7■■■■□ 20.4
SEC23IP-206ENST00000475542 FOXN2P32314 431 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 TNFSF9P41273 254 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 PRLHRP49683 370 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 STXBP1P61764 594 aaKnown RBP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CYP24A1Q07973 514 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 ZNF266Q14584 549 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 TEX30Q5JUR7 227 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 FAM222AQ5U5X8 452 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 TMEM136Q6ZRR5 245 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 MRPL55Q7Z7F7 128 aaKnown RBP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CSGALNACT2Q8N6G5 542 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 CHST4Q8NCG5 386 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 ZNF680Q8NEM1 530 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 OR9K2Q8NGE7 335 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 TMEM230Q96A57 120 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 DCPSQ96C86 337 aaKnown RBP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 IP6K3Q96PC2 410 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 SLC2A8Q9NY64 477 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 UXTQ9UBK9 157 aaPredicted RBP1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 LGALS13Q9UHV8 139 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 LTBP4Q8N2S1 1624 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 SHROOM3Q8TF72 1996 aa1.75□□□□□ -2.13
SEC23IP-206ENST00000475542 TRIOBPQ9H2D6 2365 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 SMIM26A0A096LP01 95 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 IGHV3-49A0A0A0MS15 119 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 IGHV3-72A0A0B4J1Y9 119 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 SMKR1H3BMG3 65 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 AIM2O14862 343 aa1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 EIF4E2O60573 245 aaKnown RBP1.74□□□□□ -2.13
SEC23IP-206ENST00000475542 EIF1BO60739 113 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms