RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CASTOR1Q8WTX7 329 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 SMPDL3BQ92485 455 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 DNASE1L2Q92874 299 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 SMARCD2Q92925 531 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM186Q96B77 213 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 ANKRD9Q96BM1 317 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 KCTD7Q96MP8 289 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 PANX1Q96RD7 426 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 FCRL5Q96RD9 977 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 IL4I1Q96RQ9 567 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 CD180Q99467 661 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 COPS8Q99627 209 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 MS4A8Q9BY19 250 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 SELENOIQ9C0D9 397 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM27Q9HBJ8 222 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 Q9N2J8 555 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 IL23AQ9NPF7 189 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM100Q9NV29 134 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 PLEKHJ1Q9NW61 149 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 NDUFB11Q9NX14 153 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 CCDC167Q9P0B6 97 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 NTMQ9P121 344 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 B3GAT1Q9P2W7 334 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 NEU3Q9UQ49 428 aa5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 UBE2J1Q9Y385 318 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-215ENST00000475319 PHIPQ8WWQ0 1821 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 TRPM7Q96QT4 1865 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 FXYD6-FXYD2A0A087WZ82 144 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 UBE2QL1A1L167 161 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 C7orf77A4D0Y5 90 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 FBLL1A6NHQ2 334 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 VSTM2BA6NLU5 285 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR2AG2A6NM03 316 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ZNF705GA8MUZ8 300 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 C17orf105B2RV13 164 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 B5MCH6 92 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 M0R036 132 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 FXYD1O00168 92 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ZNF593O00488 134 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 GOSR2O14653 212 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 SLC16A5O15375 505 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 MPZL2O60487 215 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 STC2O76061 302 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 CDRT1O95170 752 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 FARS2O95363 451 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 TSPAN13O95857 204 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ACTL6AO96019 429 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 MT-CO2P00403 227 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 PTHP01270 115 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 SFTA3P0C7M3 94 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ETFAP13804 333 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ZNF37AP17032 561 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 IDSP22304 550 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 CXCR1P25024 350 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 EPHA2P29317 976 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 S100GP29377 79 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR10J1P30954 320 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 RPS10P46783 165 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 SLC6A8P48029 635 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ARRB1P49407 418 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 RAB9AP51151 201 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 CAV2P51636 162 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 LILRA4P59901 499 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ST8SIA6P61647 398 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 RAB11AP62491 216 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 RHOGP84095 191 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ABHD18Q0P651 414 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 NFATC2Q13469 925 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 GPR18Q14330 331 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 CEBPEQ15744 281 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HYAL4Q2M3T9 481 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 PRTGQ2VWP7 1150 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 PGGHGQ32M88 737 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ARL13AQ5H913 290 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ELFN2Q5R3F8 820 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR2G6Q5TZ20 316 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 CST9Q5W186 159 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 LAIR1Q6GTX8 287 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 DOK6Q6PKX4 331 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 TRMT1LQ7Z2T5 733 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 ADGRE4PQ86SQ3 457 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 SERPINA9Q86WD7 417 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 IGDCC3Q8IVU1 814 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 KCNRGQ8N5I3 272 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 FRMD1Q8N878 549 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HJURPQ8NCD3 748 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR4P4Q8NGL7 312 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR9I1Q8NGQ6 314 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 OR13C4Q8NGS5 318 aa5.37□□□□□ -1.55
ECHDC1-215ENST00000475319 HMGCLL1Q8TB92 370 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms