RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CD55P08174 381 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 LAP3P28838 519 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 CD47Q08722 323 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 ZNF154Q13106 437 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 BAMBIQ13145 260 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 SEC23BQ15437 767 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 ARMCX4Q5H9R4 360 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 ZFP1Q6P2D0 407 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 TBPL2Q6SJ96 375 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 MBOAT2Q6ZWT7 520 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 DOK3Q7L591 496 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
SRRT-209ENST00000474896 OR4C15Q8NGM1 316 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 DNAJB9Q9UBS3 223 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
SRRT-209ENST00000474896 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 PKD1L1Q8TDX9 2849 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 H3BNX3 289 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 GNGT2O14610 69 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 IGF2P01344 180 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 CST2P09228 141 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 TSPAN19P0C672 248 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 IFI30P13284 250 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 ARHGDIAP52565 204 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 HMGA2P52926 109 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 PPP1R8Q12972 351 aaKnown RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 PSG7Q13046 419 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 KLF17Q5JT82 389 aaPredicted RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 RRM2BQ7LG56 351 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 KLHL36Q8N4N3 616 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 LIPHQ8WWY8 451 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 RBP7Q96R05 134 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 UNKLQ9H9P5 680 aaKnown RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 S100A14Q9HCY8 104 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 TMEM106BQ9NUM4 274 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 CGGBP1Q9UFW8 167 aaPredicted RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
SRRT-209ENST00000474896 U3KQV3 271 aa13.17□□□□□ -0.3
SRRT-209ENST00000474896 TANC2Q9HCD6 1990 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 H3BSA7 217 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 IGHMP01871 453 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 FCGR1AP12314 374 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 ZNF12P17014 697 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 FASP25445 335 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 GUCA1AP43080 201 aaPredicted RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 SLC6A9P48067 706 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 PCBD1P61457 104 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 SEC61A1P61619 476 aaKnown RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 PRKCDQ05655 676 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 GK3PQ14409 553 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 TAF11Q15544 211 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 ATP6AP1Q15904 470 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 ARL9Q6T311 187 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 SPICQ8N5J4 248 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 STMN2Q93045 179 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 ZNF48Q96MX3 618 aaPredicted RBP13.16□□□□□ -0.3
SRRT-209ENST00000474896 INSIG2Q9Y5U4 225 aa13.16□□□□□ -0.3
SRRT-209ENST00000474896 HTR3EA5X5Y0 456 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 NPIPB13A6NJU9 1138 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 NPIPB4C9JG80 1138 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 OR10H3O60404 316 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ICMTO60725 284 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 E2F6O75461 281 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 CCNB2O95067 398 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 NR2C1P13056 603 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
SRRT-209ENST00000474896 TMEM155Q4W5P6 130 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ALG10Q5BKT4 473 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ZNF283Q8N7M2 679 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 OR2Z1Q8NG97 314 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.3
SRRT-209ENST00000474896 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 MRI1Q9BV20 369 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
SRRT-209ENST00000474896 KRCC1Q9NPI7 259 aaPredicted RBP13.15□□□□□ -0.3
SRRT-209ENST00000474896 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
SRRT-209ENST00000474896 A0A1W2PPL8 197 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms