RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FAM180AQ6UWF9 173 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 PLXDC2Q6UX71 529 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 PAMR1Q6UXH9 720 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 LRRN1Q6UXK5 716 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TFAP2EQ6VUC0 442 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CFAP77Q6ZQR2 320 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 KRT77Q7Z794 578 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 DPPA2Q7Z7J5 298 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 LINC00346Q8IVM7 164 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 SLC22A24Q8N4F4 322 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 YIPF7Q8N8F6 280 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 C9orf106Q8NAJ2 232 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 OR6K3Q8NGY3 331 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 FAM57AQ8TBR7 257 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 EDARADDQ8WWZ3 215 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 RGP1Q92546 391 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 THRSPQ92748 146 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 APH1AQ96BI3 265 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 FBXO17Q96EF6 278 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 KCTD7Q96MP8 289 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ZFP3Q96NJ6 502 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CDADC1Q9BWV3 514 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 RBM24Q9BX46 236 aaKnown RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 HDHD5Q9BXW7 423 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 PPIL3Q9H2H8 161 aaKnown RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 KCNN2Q9H2S1 579 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 RNF167Q9H6Y7 350 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 MOB1AQ9H8S9 216 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 SEC61A2Q9H9S3 476 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 EMC7Q9NPA0 242 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 G6PC2Q9NQR9 355 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 PLSCR4Q9NRQ2 329 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 FAM206AQ9NX38 181 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF224Q9NZL3 707 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ASH2LQ9UBL3 628 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 IKZF2Q9UKS7 526 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 DNAJC13O75165 2243 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 DSPP15924 2871 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ZFYVE26Q68DK2 2539 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 LOC100506127A0A0U1RQW1 187 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SHISA3A0PJX4 238 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 OR6C6A6NF89 314 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 VGLL3A8MV65 326 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF879B4DU55 563 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF587BE7ETH6 402 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PSMD9O00233 223 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 RER1O15258 196 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PIN1P1O15428 100 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SYNGR3O43761 229 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TNFSF13O75888 250 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 CLPXO76031 633 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TOXO94900 526 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 IL18BPO95998 194 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PRB1P04280 392 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 INHBBP09529 407 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 H2BFMP0C1H6 154 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 COX5BP10606 129 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 COX5AP20674 150 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 CCL1P22362 96 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 CFPP27918 469 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 MPGP29372 298 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TGFBR1P36897 503 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 RPS19P39019 145 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PSMA6P60900 246 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PCBD1P61457 104 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 LSM3P62310 102 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 GRB2P62993 217 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SCRN3Q0VDG4 424 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ECH1Q13011 328 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 DYNC1I2Q13409 638 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 INSL4Q14641 139 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SGCAQ16586 387 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 DGUOKQ16854 277 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ZMAT1Q5H9K5 638 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 WDR38Q5JTN6 314 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ELFN2Q5R3F8 820 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 C1QTNF12Q5T7M4 302 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 C22orf42Q6IC83 251 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 COLCA1Q6ZS62 124 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ABHD12BQ7Z5M8 362 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TPRA1Q86W33 373 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 MCEMP1Q8IX19 187 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SKA3Q8IX90 412 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ELMOD2Q8IZ81 293 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF843Q8N446 348 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 PLPP7Q8NBV4 271 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 OR2AJ1Q8NGZ0 328 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 OR5AK2Q8NH90 309 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TBC1D15Q8TC07 691 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 BCL2L2Q92843 193 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ITFG2Q969R8 447 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM203Q969S6 136 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SLC25A46Q96AG3 418 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SNRNP40Q96DI7 357 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 ALKBH3Q96Q83 286 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TRIB1Q96RU8 372 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TSC22D3Q99576 134 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 KCNJ15Q99712 375 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms