RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GTF2A1LQ9UNN4 478 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 MRPS7Q9Y2R9 242 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 GGT3PA6NGU5 568 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 A6NJ64 397 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 G3V3Y1 287 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 H7C417 338 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 SULT1C2O00338 296 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 P2RY10O00398 339 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 CDK2AP1O14519 115 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 RGS13O14921 159 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 DOK2O60496 412 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 RAD1O60671 282 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 GSTT2BP0CG30 244 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 RAB6AP20340 208 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 CNR1P21554 472 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 GIFP27352 417 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 HTR2CP28335 458 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 EFNB2P52799 333 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 CLDN6P56747 220 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 RAB25P57735 213 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 ENDOGQ14249 297 aaKnown RBP8.68□□□□□ -1.02
USP39-214ENST00000474572 RNASE12Q5GAN4 147 aaKnown RBP8.68□□□□□ -1.02
USP39-214ENST00000474572 PHYHD1Q5SRE7 291 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 CARD17Q5XLA6 110 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 ADGRE4PQ86SQ3 457 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 SERPINA12Q8IW75 414 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 OR51A2Q8NGJ7 313 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 OR2AJ1Q8NGZ0 328 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 OR56B4Q8NH76 319 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 PNPLA2Q96AD5 504 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
USP39-214ENST00000474572 FYTTD1Q96QD9 318 aaKnown RBP8.68□□□□□ -1.02
USP39-214ENST00000474572 ACTR6Q9GZN1 396 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 NELFAQ9H3P2 528 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 DEPPQ9NTK1 212 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 MTFP1Q9UDX5 166 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 RCE1Q9Y256 329 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 FLVCR1Q9Y5Y0 555 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 MRPS18BQ9Y676 258 aaKnown RBP8.68□□□□□ -1.02
USP39-214ENST00000474572 R4GN57 208 aa8.68□□□□□ -1.02
USP39-214ENST00000474572 A0A0A6YYJ9 748 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 A8MV72 311 aaPredicted RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 NPIPA2E9PIF3 369 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 NPIPA3F8WFD2 350 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 H3BSH0 61 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 EIF1AYO14602 144 aaKnown RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 TNFSF11O14788 317 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 DHHO43323 396 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 GMDSO60547 372 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 LMX1BO60663 402 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 PRAF2O60831 178 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 C1QBP02746 253 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 MT-ND4P03905 459 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 YES1P07947 543 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 H2AFB2P0C5Z0 115 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 MSR1P21757 451 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 BDKRB2P30411 391 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 OTX1P32242 354 aaPredicted RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 CDAP32320 146 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 CYB561P49447 251 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 NKX2-5P52952 324 aaPredicted RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 GFRA1P56159 465 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 GRB2P62993 217 aaKnown RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 FOXO1Q12778 655 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 BCL2A1Q16548 175 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 GSG1Q2KHT4 349 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 TMEM255AQ5JRV8 349 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 ZNF813Q6ZN06 617 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 CDH26Q8IXH8 852 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 C20orf196Q8IYI0 205 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 PLPP7Q8NBV4 271 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 OR1J2Q8NGS2 313 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 GCDHQ92947 438 aaPredicted RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 EDEM2Q9BV94 578 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 METTL17Q9H7H0 456 aaPredicted RBP8.67□□□□□ -1.02
USP39-214ENST00000474572 SEC61A2Q9H9S3 476 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 TMEM9BQ9NQ34 198 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 DIABLOQ9NR28 239 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 TAS2R8Q9NYW2 309 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 ASH2LQ9UBL3 628 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 FBLN5Q9UBX5 448 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 KLK11Q9UBX7 282 aa8.67□□□□□ -1.02
USP39-214ENST00000474572 ALPK2Q86TB3 2170 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 IGHV3-15A0A0B4J1V0 119 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 A0A1B0GVI7 797 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 PINLYPA6NC86 204 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 LINC01387J3KSC0 135 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 SYT7O43581 403 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
USP39-214ENST00000474572 NEURL1O76050 574 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 KDM4BO94953 1096 aa8.66□□□□□ -1.02
USP39-214ENST00000474572 RFPL3SP0C7P2 107 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms