RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MIOXQ9UGB7 285 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 SLC23A2Q9UGH3 650 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 RNF115Q9Y4L5 304 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 LOC100289279A0A1B0GTE1 492 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 TMEM129A0AVI4 362 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 C5orf49A4QMS7 147 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 FITM1A5D6W6 292 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 KRBA1A5PL33 1030 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 B9A039 149 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 ANKRD65E5RJM6 399 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 TXNL1O43396 289 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 PIP5K1CO60331 668 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 CD79BP40259 229 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 RAP2BP61225 183 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 EBPQ15125 230 aaKnown RBP4.17□□□□□ -1.74
CCNL1-215ENST00000474539 ACKR1Q16570 336 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 CEACAM16Q2WEN9 425 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 FBXW9Q5XUX1 488 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 SFXN4Q6P4A7 337 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 UNQ9370/PRO34162Q6UXP9 181 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 TMED4Q7Z7H5 227 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 SNX29P2Q8IUI4 249 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 SLC16A11Q8NCK7 471 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 OR4M1Q8NGD0 313 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 OR13C2Q8NGS9 318 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 OR10D3Q8NH80 312 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 ADGRG7Q96K78 797 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 PFDN5Q99471 154 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 RNF2Q99496 336 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 OR51E2Q9H255 320 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 ZNF696Q9H7X3 374 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 EBF2Q9HAK2 575 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 RNF7Q9UBF6 113 aa4.17□□□□□ -1.74
CCNL1-215ENST00000474539 C13orf42A0A1B0GVH6 325 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 TMEM200CA6NKL6 621 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SHOXO15266 292 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 NOS1APO75052 506 aaPredicted RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 RP2O75695 350 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SNCGO76070 127 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 PLATP00750 562 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ZNF728P0DKX0 622 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 RPS2P15880 293 aaKnown RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ATF1P18846 271 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SERPINA2P20848 420 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 GALP22466 123 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 DTYMKP23919 212 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 GZMKP49863 264 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 PAFAH1B2P68402 229 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 B4GALNT1Q00973 533 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 COL9A3Q14050 684 aaPredicted RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 OGFRL1Q5TC84 451 aaPredicted RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 FAHD1Q6P587 224 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 MEX3BQ6ZN04 569 aaKnown RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 TMPRSS7Q7RTY8 843 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 DCXRQ7Z4W1 244 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 VASH2Q86V25 355 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 GLCCI1Q86VQ1 547 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 REEP6Q96HR9 211 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 TNFRSF13CQ96RJ3 184 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SLC6A7Q99884 636 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ADAT1Q9BUB4 502 aaKnown RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 COMMD5Q9GZQ3 224 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 UBTD1Q9HAC8 227 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 CD248Q9HCU0 757 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 HINT3Q9NQE9 182 aaKnown RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 PRDM6Q9NQX0 595 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 WDR37Q9Y2I8 494 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 NPTNQ9Y639 398 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SERPINE3A8MV23 424 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 F2RL2O00254 374 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 F10P00742 488 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 MBP02144 154 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 CD1EP15812 388 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 CRHBPP24387 322 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 CALCRP30988 508 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 PGGT1BP53609 377 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 DOC2BQ14184 412 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SLC22A6Q4U2R8 563 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 UNQ6494/PRO21346Q6UXR6 183 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 GCNT2Q8N0V5 402 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ZBTB34Q8NCN2 500 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 OR1M1Q8NGA1 313 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 CCL4L1Q8NHW4 92 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 NAT14Q8WUY8 206 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ANKRD60Q9BZ19 345 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 MS4A7Q9GZW8 240 aaPredicted RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ZNF665Q9H7R5 613 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 NOX4Q9NPH5 578 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ZNF71Q9NQZ8 489 aaPredicted RBP4.16□□□□□ -1.74
CCNL1-215ENST00000474539 RASL12Q9NYN1 266 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ATAD5Q96QE3 1844 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 TRAV27A0A087WT01 109 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 IGHV3-20A0A0C4DH32 117 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 SLC35F4A4IF30 521 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 NUDT19A8MXV4 375 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 INMT-MINDY4F8WBC2 141 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 G3V3Y1 287 aa4.16□□□□□ -1.74
CCNL1-215ENST00000474539 ERVH48-1M5A8F1 160 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms