RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 NMNAT3Q96T66 252 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 COQ7Q99807 217 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 TMEM106BQ9NUM4 274 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 ARL2BPQ9Y2Y0 163 aa13.34□□□□□ -0.27
CDPF1-205ENST00000474256 LOC105371242A0A075B767 164 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 ISPDA4D126 451 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 J3QLI3 93 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 VENTXO95231 258 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 IGHV2-70P01814 119 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
CDPF1-205ENST00000474256 GATA3P23771 443 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 RRM2P31350 389 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 IFNGR2P38484 337 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 CENPAP49450 140 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 GYS2P54840 703 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
CDPF1-205ENST00000474256 C16orf89Q6UX73 402 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 JAZF1Q86VZ6 243 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 SLC26A10Q8NG04 563 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 OR5L1Q8NGL2 311 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 OR4K13Q8NH42 304 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 APOBEC3DQ96AK3 386 aaPredicted RBP13.33□□□□□ -0.28
CDPF1-205ENST00000474256 IFT27Q9BW83 186 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
CDPF1-205ENST00000474256 NDE1Q9NXR1 346 aa13.33□□□□□ -0.28
CDPF1-205ENST00000474256 SURF4O15260 269 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 IDH3BO43837 385 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 RENP00797 406 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 RBMXP38159 391 aaKnown RBP13.32□□□□□ -0.28
CDPF1-205ENST00000474256 HMGA2P52926 109 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 GNGT1P63211 74 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
CDPF1-205ENST00000474256 TSPAN31Q12999 210 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 HLXQ14774 488 aaPredicted RBP13.32□□□□□ -0.28
CDPF1-205ENST00000474256 KRTAP27-1Q3LI81 207 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 DCAF12L2Q5VW00 463 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF620Q6ZNG0 422 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 C1QL2Q7Z5L3 287 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.32□□□□□ -0.28
CDPF1-205ENST00000474256 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 GNPDA2Q8TDQ7 276 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 ZFAND2BQ8WV99 257 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 ITLN1Q8WWA0 313 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
CDPF1-205ENST00000474256 UBAP1Q9NZ09 502 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 PPP1R3CQ9UQK1 317 aa13.32□□□□□ -0.28
CDPF1-205ENST00000474256 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 PPIAL4CA0A0B4J2A2 164 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 DCTN3O75935 186 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 KRT36O76013 467 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 SBK2P0C263 348 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 EPHA1P21709 976 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
CDPF1-205ENST00000474256 NOS3P29474 1203 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 TMEM155Q4W5P6 130 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OR2T2Q6IF00 324 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 SLC18B1Q6NT16 456 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 USP43Q70EL4 1123 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
CDPF1-205ENST00000474256 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OR5AS1Q8N127 324 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OR8G5Q8NG78 346 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 ST7LQ8TDW4 575 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF418Q8TF45 676 aaPredicted RBP13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OR2V2Q96R30 315 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 C1QTNF5Q9BXJ0 243 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 PTTG3PQ9NZH4 202 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 OPN4Q9UHM6 478 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 CYB5R1Q9UHQ9 305 aa13.31□□□□□ -0.28
CDPF1-205ENST00000474256 FOXH1O75593 365 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 GGT2P36268 569 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 MAGEA2P43356 314 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 BTG1P62324 171 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 LCN2P80188 198 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 SLC36A3Q495N2 470 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 SLC27A4Q6P1M0 643 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 CFAP77Q6ZQR2 320 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
CDPF1-205ENST00000474256 SDR9C7Q8NEX9 313 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 OR52E2Q8NGJ4 325 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
CDPF1-205ENST00000474256 DDOQ99489 341 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 C7orf69Q9H7B7 122 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 PATZ1Q9HBE1 687 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms