RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TNFSF9P41273 254 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 EIF3EP60228 445 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 FLI1Q01543 452 aaPredicted RBP1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ART3Q13508 389 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 XKR4Q5GH76 650 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 PPM1LQ5SGD2 360 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ADNP2Q6IQ32 1131 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 TET2Q6N021 2002 aaPredicted RBP1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 DNAJC24Q6P3W2 148 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC16A14Q7RTX9 510 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM256Q8N2U0 113 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 CSGALNACT2Q8N6G5 542 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 LRRC52Q8N7C0 313 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 COX18Q8N8Q8 333 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 OR5B3Q8NH48 314 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 LRRC29Q8WV35 223 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 EEF1AKMT3Q96AZ1 226 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ECHDC3Q96DC8 303 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC29A1Q99808 456 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 TIMM29Q9BSF4 260 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM165Q9HC07 324 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 RHBDL2Q9NX52 303 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 PISDQ9UG56 409 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 PALLDQ8WX93 1383 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ADGRL1O94910 1474 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 TRBV9A0A0B4J1U6 114 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 IGHV7-4-1A0A0J9YVY3 117 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SYCE1LA8MT33 242 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 PDZK1P1A8MUH7 402 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 H0YJW9 148 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SCAMP2O15127 329 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 AQP8O94778 261 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 TSPAN13O95857 204 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 PAHP00439 452 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ARG1P05089 322 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ANXA5P08758 320 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 OR8U9P0C7N5 309 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ATF6P18850 670 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ME2P23368 584 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 U2AF2P26368 475 aaKnown RBP eCLIP1.69□□□□□ -2.141e-6■■□□□ 14
ECHDC1-213ENST00000474240 SP4Q02446 784 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 TGM3Q08188 693 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 PPIDQ08752 370 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF616Q08AN1 781 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF726P1Q15940 193 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 MPV17L2Q567V2 206 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 YIF1BQ5BJH7 314 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SAXO2Q658L1 398 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 C22orf42Q6IC83 251 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 REEP3Q6NUK4 255 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 PRELID2Q8N945 189 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SNX31Q8N9S9 440 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 OR4A4PQ8NGN8 299 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 OR6N1Q8NGY5 312 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 AKR7LQ8NHP1 331 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ELMO1Q92556 727 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 KIFAP3Q92845 792 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF488Q96MN9 340 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 GSDMAQ96QA5 445 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 FOXC2Q99958 501 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 C1orf50Q9BV19 199 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 NUP58Q9BVL2 599 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 OR51M1Q9H341 326 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 EDA2RQ9HAV5 297 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 MED4Q9NPJ6 270 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM9BQ9NQ34 198 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 FBXO6Q9NRD1 293 aaPredicted RBP1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 MTCH1Q9NZJ7 389 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 SIGLEC9Q9Y336 463 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 CBY1Q9Y3M2 126 aa1.69□□□□□ -2.14
ECHDC1-213ENST00000474240 IGLV1-36A0A0B4J1U3 117 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 XKRY2A2RUG3 117 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 A8MUU9 505 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 SMKR1H3BMG3 65 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 TAAR5O14804 337 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 NVLO15381 856 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 CBR3O75828 277 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 OR2J3O76001 311 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 IGHV3-11P01762 117 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 SERPINE2P07093 398 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 UQCRFS1P1P0C7P4 283 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 MYL2P10916 166 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 PSMB5P28074 263 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 RBM34P42696 430 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 MRPL19P49406 292 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 RGS8P57771 180 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 CDK5Q00535 292 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 PRKCDQ05655 676 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 FAM222AQ5U5X8 452 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 GPR107Q5VW38 600 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM205Q6UW68 189 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 NPSR1Q6W5P4 371 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 MBOAT1Q6ZNC8 495 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 LRP11Q86VZ4 500 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 NPWQ8N729 165 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 SPANXA2-OT1Q8N9U9 137 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 UBAC2Q8NBM4 344 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 OR11H7Q8NGC8 314 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms