RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 J3QW42 95 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 ALDH3B1P43353 468 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 EIF2B1Q14232 305 aaKnown RBP11.81□□□□□ -0.52
USF1-205ENST00000473969 LCN1P1Q5VSP4 162 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 CFAP77Q6ZQR2 320 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 DCXRQ7Z4W1 244 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 LRP11Q86VZ4 500 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 ZNF101Q8IZC7 436 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 ZNRF4Q8WWF5 429 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 SLC7A6Q92536 515 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
USF1-205ENST00000473969 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
USF1-205ENST00000473969 COPS4Q9BT78 406 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 HCAR1Q9BXC0 346 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 OR2J1Q9GZK6 312 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
USF1-205ENST00000473969 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 PLCE1Q9P212 2302 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 TLX2O43763 284 aaPredicted RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 ICMTO60725 284 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 CLPTM1O96005 669 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 NGFP01138 241 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 DBHP09172 617 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 CSF3P09919 207 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 RPS27P42677 84 aaKnown RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 SLC15A1P46059 708 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 PPP2R2BQ00005 443 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 MALLQ13021 153 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 APOFQ13790 326 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 CARTPTQ16568 116 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 ALKBH6Q3KRA9 238 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 LINC01590Q5TEZ4 76 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 SLX4IPQ5VYV7 408 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 LYPD4Q6UWN0 246 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 ZBTB49Q6ZSB9 765 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 CBR4Q8N4T8 237 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 TCEANCQ8N8B7 351 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 KLF14Q8TD94 323 aaPredicted RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 EME1Q96AY2 570 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 SLAMF6Q96DU3 332 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 TPK1Q9H3S4 243 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 MYOZ1Q9NP98 299 aaPredicted RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 TMEFF2Q9UIK5 374 aaPredicted RBP11.8□□□□□ -0.52
USF1-205ENST00000473969 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 ARID1AO14497 2285 aa11.8□□□□□ -0.52
USF1-205ENST00000473969 IGLV3-9A0A075B6K5 115 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 EI24O14681 340 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 PRKYO43930 277 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 IGHV3-13P01766 116 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 APOC1P02654 83 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 LCATP04180 440 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 HSD11B1P28845 292 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 LIPAP38571 399 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 SLC6A9P48067 706 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 PDLIM4P50479 330 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 ALDH3A2P51648 485 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 CDC42P60953 191 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 GRB2P62993 217 aaKnown RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 ZMAT1Q5H9K5 638 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 DPY19L4Q7Z388 723 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 TMEM163Q8TC26 289 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 THEM6Q8WUY1 208 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 FAM168AQ92567 244 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 MARS2Q96GW9 593 aaKnown RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 MAP6Q96JE9 813 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 GABARAPL3Q9BY60 117 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 SP140LQ9H930 580 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 IMPAD1Q9NX62 359 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 USE1Q9NZ43 259 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 MYEF2Q9P2K5 600 aaKnown RBP11.79□□□□□ -0.52
USF1-205ENST00000473969 STARD10Q9Y365 291 aa11.79□□□□□ -0.52
USF1-205ENST00000473969 ZNF878C9JN71 531 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 M0R135 149 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ALPLP05186 524 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 LYNP07948 512 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ACSM4P0C7M7 580 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 NAT2P11245 290 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 FOSL1P15407 271 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 MPV17P39210 176 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 ZNF81P51508 661 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 TNK1Q13470 666 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 PCK2Q16822 640 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 PCGF3Q3KNV8 242 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 C12orf73Q69YU5 71 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
USF1-205ENST00000473969 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms