RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HINT3Q9NQE9 182 aaKnown RBP16.17■□□□□ 0.18
PTCD3-210ENST00000473829 SLCO1C1Q9NYB5 712 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 KIF17Q9P2E2 1029 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 STARD10Q9Y365 291 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 LOC390937A0A1W2PQ73 354 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 C17orf100A8MU93 164 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 SURF4O15260 269 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF823P16415 610 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 FASP25445 335 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 GCH1P30793 250 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 MMP15P51511 669 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 ARHGDIAP52565 204 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 ARL9Q6T311 187 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 UNQ6126/PRO20091Q6UXV3 157 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 OR2AJ1Q8NGZ0 328 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 UBASH3BQ8TF42 649 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 PTP4A1Q93096 173 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 PITX2Q99697 317 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 PIMREGQ9BSJ6 248 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 CDADC1Q9BWV3 514 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 BPESC1Q9GZL8 116 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 SLC25A19Q9HC21 320 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 PAPOLBQ9NRJ5 636 aaKnown RBP16.16■□□□□ 0.18
PTCD3-210ENST00000473829 KCNG2Q9UJ96 466 aa16.16■□□□□ 0.18
PTCD3-210ENST00000473829 ZSCAN5BA6NJL1 495 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 H3BSA7 217 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 NDUFS8O00217 210 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 EBAG9O00559 213 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 MITFO75030 526 aaPredicted RBP16.15■□□□□ 0.18
PTCD3-210ENST00000473829 NR4A2P43354 598 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 LOXL1Q08397 574 aaPredicted RBP16.15■□□□□ 0.18
PTCD3-210ENST00000473829 PSG7Q13046 419 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 KPNB1Q14974 876 aaKnown RBP16.15■□□□□ 0.18
PTCD3-210ENST00000473829 PCK2Q16822 640 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 C1orf174Q8IYL3 243 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF786Q8N393 782 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 OR6K6Q8NGW6 343 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 SNX33Q8WV41 574 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 PYDC1Q8WXC3 89 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 OTULINQ96BN8 352 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 ATF6BQ99941 703 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 GABARAPL1Q9H0R8 117 aa16.15■□□□□ 0.18
PTCD3-210ENST00000473829 FN1P02751 2386 aaKnown RBP16.15■□□□□ 0.18
PTCD3-210ENST00000473829 ANK3Q12955 4377 aaKnown RBP16.15■□□□□ 0.18
PTCD3-210ENST00000473829 ABCA1O95477 2261 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 G3V2T6 193 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 SPARCP09486 303 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 ACSM4P0C7M7 580 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 ZNF23P17027 643 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 ANOS1P23352 680 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 FMO3P31513 532 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 ENTPD1P49961 510 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 ACTR3P61158 418 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 PLBD1Q6P4A8 553 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 HIPK1Q86Z02 1210 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 PARP8Q8N3A8 854 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 DNAJC9Q8WXX5 260 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 YIPF5Q969M3 257 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 DCLRE1CQ96SD1 692 aaKnown RBP16.14■□□□□ 0.17
PTCD3-210ENST00000473829 SEMA6AQ9H2E6 1030 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 PTTG3PQ9NZH4 202 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 GPR160Q9UJ42 338 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 C2CD3Q4AC94 2353 aa16.14■□□□□ 0.17
PTCD3-210ENST00000473829 IGHV4-61A0A0C4DH41 118 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 H3BNX3 289 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 IGHV1-46P01743 117 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 FCGR1AP12314 374 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 USF1P22415 310 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-210ENST00000473829 COL8A2P25067 703 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 GIFP27352 417 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 ZNF81P51508 661 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 CRISP1P54107 249 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 CCL8P80075 99 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 RIN1Q13671 783 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 GGTLC2Q14390 218 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 HLXQ14774 488 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-210ENST00000473829 TMEM249Q2WGJ8 235 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 COLCA1Q6ZS62 124 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 DCXRQ7Z4W1 244 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 NAA40Q86UY6 237 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 BBS1Q8NFJ9 593 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 CMBLQ96DG6 245 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 OR51V1Q9H2C8 321 aa16.13■□□□□ 0.17
PTCD3-210ENST00000473829 PURGQ9UJV8 347 aaKnown RBP16.13■□□□□ 0.17
PTCD3-210ENST00000473829 NIPBLQ6KC79 2804 aaeCLIP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 ABCA2Q9BZC7 2435 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 PRR23D1E9PI22 279 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 F5H5K5 113 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 J3QW42 95 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 ZNF593O00488 134 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 GLCEO94923 617 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 HMGN1P05114 100 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 PRR23D2P0DMB1 279 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 EPHA2P29317 976 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 RGS6P49758 472 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 MOGQ16653 247 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 TSTQ16762 297 aaKnown RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 TEX30Q5JUR7 227 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 KDM4DQ6B0I6 523 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 ZDHHC13Q8IUH4 622 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms