RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SELENOFO60613 162 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 INMTO95050 263 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 SYNGR4O95473 234 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 IGHG1P01857 330 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF708P17019 499 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF43P17038 809 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 JUNBP17275 347 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ATP6V1E1P36543 226 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 PTH2RP49190 550 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 SUCLG1P53597 346 aaKnown RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 GP2P55259 537 aaKnown RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CLDN15P56746 228 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CLDN18P56856 261 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CARD18P57730 90 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CLRN1P58418 232 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 RAC3P60763 192 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 EMX1Q04741 257 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 RUNX1T1Q06455 604 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 FMODQ06828 376 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 GGTLC2Q14390 218 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 IRF3Q14653 427 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 SLC35D3Q5M8T2 416 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CARD17Q5XLA6 110 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 NSUN5P2Q63ZY6 315 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 TMEM225Q6GV28 225 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 DNM1P34Q6PK57 102 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 WDFY1Q8IWB7 410 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CENPSQ8N2Z9 138 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 POMGNT2Q8NAT1 580 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 SYT14Q8NB59 555 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 OR10H4Q8NGA5 316 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 OR9K2Q8NGE7 335 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 OR2T4Q8NH00 348 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ROBO4Q8WZ75 1007 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 RORBQ92753 470 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 PTP4A1Q93096 173 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CPNE4Q96A23 557 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 TMIGD2Q96BF3 282 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF845Q96IR2 970 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 OXGR1Q96P68 337 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 SNX18Q96RF0 628 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 TBX5Q99593 518 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CCL19Q99731 98 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ALG12Q9BV10 488 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 EMC6Q9BV81 110 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 MND1Q9BWT6 205 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CDCA4Q9BXL8 241 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 TTTY10Q9BZA0 68 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ADGRL4Q9HBW9 690 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 FGF20Q9NP95 211 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ACKR4Q9NPB9 350 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 FANCFQ9NPI8 374 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ACOT13Q9NPJ3 140 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 TIGARQ9NQ88 270 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 MRPS18AQ9NVS2 196 aaKnown RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 ASB6Q9NWX5 421 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 VSX1Q9NZR4 365 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 DIMT1Q9UNQ2 313 aaKnown RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 CR1P17927 2039 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 IGLV1-36A0A0B4J1U3 117 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 SLC22A23A1A5C7 686 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 MBD3L3A6NE82 208 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-205ENST00000472928 TVP23AA6NH52 213 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CD8B2A6NJW9 211 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 C12orf71A8MTZ7 269 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF99A8MXY4 864 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CENPBD1B2RD01 187 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 DCTN6O00399 190 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 MSTNO14793 375 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 SLC16A7O60669 478 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 NOL3O60936 208 aaKnown RBP5.59□□□□□ -1.51
HDAC1-205ENST00000472928 SULT1C4O75897 302 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 GLCEO94923 617 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 VAMP5O95183 116 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 IL18BPO95998 194 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ACTL6AO96019 429 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 IGHA1P01876 353 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 HLA-DQA2P01906 255 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 TFP02787 698 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 SBK2P0C263 348 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 HSMCR30P0CW71 290 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 PAX1P15863 534 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CTLA4P16410 223 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CTSSP25774 331 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 DCKP27707 260 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 LOXP28300 417 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CRABP1P29762 137 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 TTKP33981 857 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CD79BP40259 229 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CENPAP49450 140 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 EIF2B2P49770 351 aaKnown RBP5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ENTPD1P49961 510 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ETV1P50549 477 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CLDN17P56750 224 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ACTC1P68032 377 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 ACTA1P68133 377 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 H3F3AP84243 136 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 TNK1Q13470 666 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 CAMK2DQ13557 499 aa5.59□□□□□ -1.51
HDAC1-205ENST00000472928 SLC17A1Q14916 467 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms