RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 SLC7A6Q92536 515 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 GTF3AQ92664 365 aaKnown RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 BPESC1Q9GZL8 116 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 HDHD2Q9H0R4 259 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 HINT3Q9NQE9 182 aaKnown RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 MRPL22Q9NWU5 206 aaKnown RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 PDP1Q9P0J1 537 aaPredicted RBP12.87□□□□□ -0.35
CALD1-215ENST00000472096 DNAJB9Q9UBS3 223 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
CALD1-215ENST00000472096 HLA-DQA2P01906 255 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 HPXP02790 462 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 PYCR1P32322 319 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 CRMP1Q14194 572 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 ELFN2Q5R3F8 820 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 SLC18B1Q6NT16 456 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 CFAP77Q6ZQR2 320 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 LINC00346Q8IVM7 164 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 PROKR2Q8NFJ6 384 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 OR9Q1Q8NGQ5 310 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 OR2T4Q8NH00 348 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 COQ7Q99807 217 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
CALD1-215ENST00000472096 POFUT1Q9H488 388 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 TBCCD1Q9NVR7 557 aa12.86□□□□□ -0.35
CALD1-215ENST00000472096 IGHV4-61A0A0C4DH41 118 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 LYNX1G3V0Z9 82 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 H3BN98 237 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 IFNGP01579 166 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 MT-ND5P03915 603 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 DBHP09172 617 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 LYNX1P0DP58 116 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 GGT2P36268 569 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 MAGEB1P43366 347 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 RIN1Q13671 783 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 MOGQ16653 247 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 PCGF3Q3KNV8 242 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 IQCF1Q8N6M8 205 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 ZNF540Q8NDQ6 660 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 ZNRF4Q8WWF5 429 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 DCLRE1CQ96SD1 692 aaKnown RBP12.85□□□□□ -0.35
CALD1-215ENST00000472096 NMNAT2Q9BZQ4 307 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 KCNG2Q9UJ96 466 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
CALD1-215ENST00000472096 NIPBLQ6KC79 2804 aaeCLIP12.85□□□□□ -0.35
CALD1-215ENST00000472096 RIIAD1A6NNX1 92 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 J3QW42 95 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 TLX2O43763 284 aaPredicted RBP12.84□□□□□ -0.35
CALD1-215ENST00000472096 DEAF1O75398 565 aaPredicted RBP12.84□□□□□ -0.35
CALD1-215ENST00000472096 TIPRLO75663 272 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 GYPBP06028 91 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 ZNF3P17036 446 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 SPI1P17947 270 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 ACHEP22303 614 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 GRK5P34947 590 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 RGS6P49758 472 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 MMP15P51511 669 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 SLC25A1P53007 311 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 PPP2R2BQ00005 443 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 OR51L1Q8NGJ5 315 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 OR2AJ1Q8NGZ0 328 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 RDH5Q92781 318 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 PNRC2Q9NPJ4 139 aaKnown RBP12.84□□□□□ -0.35
CALD1-215ENST00000472096 NKIRAS2Q9NYR9 191 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 CGGBP1Q9UFW8 167 aaPredicted RBP12.84□□□□□ -0.35
CALD1-215ENST00000472096 COMMD3-BMI1R4GMX3 469 aa12.84□□□□□ -0.35
CALD1-215ENST00000472096 PLSCR5A0PG75 271 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 ZSCAN5BA6NJL1 495 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 IGHV4-31P0DP07 118 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 CLUP10909 449 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 PSKH1P11801 424 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 ANXA8P13928 327 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 ZNF823P16415 610 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
CALD1-215ENST00000472096 ZNF23P17027 643 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 PRKACGP22612 351 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 TUBG1P23258 451 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 RPS27P42677 84 aaKnown RBP12.83□□□□□ -0.36
CALD1-215ENST00000472096 ZNF81P51508 661 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 CCL8P80075 99 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
CALD1-215ENST00000472096 PSG7Q13046 419 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 KRTAP27-1Q3LI81 207 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 SHQ1Q6PI26 577 aaKnown RBP12.83□□□□□ -0.36
CALD1-215ENST00000472096 UTP4Q969X6 686 aaKnown RBP12.83□□□□□ -0.36
CALD1-215ENST00000472096 MAP6Q96JE9 813 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 COG8Q96MW5 612 aa12.83□□□□□ -0.36
CALD1-215ENST00000472096 PITX2Q99697 317 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms