RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PPA1Q15181 289 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 TAF13Q15543 124 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 LIPNQ5VXI9 398 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 XAF1Q6GPH4 301 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 NAA40Q86UY6 237 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 KLBQ86Z14 1044 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 OR52N1Q8NH53 320 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 MUCL1Q96DR8 90 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 PELI1Q96FA3 418 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 MND1Q9BWT6 205 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 MROQ9BYG7 248 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 NPDC1Q9NQX5 325 aaPredicted RBP16.69■□□□□ 0.26
PSPC1-203ENST00000471658 DDX28Q9NUL7 540 aaKnown RBP16.69■□□□□ 0.26
PSPC1-203ENST00000471658 NPAP1Q9NZP6 1156 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF14P17017 642 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-203ENST00000471658 ANOS1P23352 680 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF83P51522 516 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-203ENST00000471658 WNT4P56705 351 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 MED22Q15528 200 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 TBCEQ15813 527 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-203ENST00000471658 NEDD8Q15843 81 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 SEZ6L2Q6UXD5 910 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 TMPRSS11AQ6ZMR5 421 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 P2RY8Q86VZ1 359 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-203ENST00000471658 ALDH16A1Q8IZ83 802 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 SYS1Q8N2H4 156 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 SVOPQ8N4V2 548 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 LINC01560Q8TB33 94 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 HSD17B8Q92506 261 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 HDHD2Q9H0R4 259 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 OBP2BQ9NPH6 170 aa16.68■□□□□ 0.26
PSPC1-203ENST00000471658 WIPF3A6NGB9 483 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 F5H5K5 113 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 SULT1C4O75897 302 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 INMTO95050 263 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 MT-ND5P03915 603 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 SERPINA5P05154 406 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 CRYGSP22914 178 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 RIDAP52758 137 aaKnown RBP16.67■□□□□ 0.26
PSPC1-203ENST00000471658 ACTA2P62736 377 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 ACTG2P63267 376 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 HGFACQ04756 655 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 PLP2Q04941 152 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 SPHARQ15513 63 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 WFDC8Q8IUA0 241 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 PPP1R14AQ96A00 147 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 COQ7Q99807 217 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 BABAM2Q9NXR7 383 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 RTTNQ86VV8 2226 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 FLNCQ14315 2725 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 UBR5O95071 2799 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-203ENST00000471658 IQCMA0A1B0GVH7 501 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 C19orf84I3L1E1 186 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 J3QKU1 62 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 PNPP00491 289 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 IGKV3-15P01624 115 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 SLC2A1P11166 492 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 CCNOP22674 350 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 STOMP27105 288 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 DEGS2Q6QHC5 323 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 PAQR4Q8N4S7 273 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-203ENST00000471658 ZFP41Q8N8Y5 198 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 LRRC46Q96FV0 321 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 POM121L2Q96KW2 1035 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 KCNJ15Q99712 375 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 MRPS26Q9BYN8 205 aaKnown RBP16.67■□□□□ 0.26
PSPC1-203ENST00000471658 OR10A4Q9H209 315 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 BRD7Q9NPI1 651 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 N6AMT1Q9Y5N5 214 aa16.67■□□□□ 0.26
PSPC1-203ENST00000471658 SIRT4Q9Y6E7 314 aaPredicted RBP16.67■□□□□ 0.26
PSPC1-203ENST00000471658 IGHV1-18A0A0C4DH31 117 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 C5orf49A4QMS7 147 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 C5orf63A6NC05 138 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF254O75437 659 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 HSD11B1P28845 292 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 MFGE8Q08431 387 aaPredicted RBP16.66■□□□□ 0.26
PSPC1-203ENST00000471658 KRTAP27-1Q3LI81 207 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 RHOUQ7L0Q8 258 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 FAM220AQ7Z4H9 259 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 KCTD20Q7Z5Y7 419 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF283Q8N7M2 679 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 RORBQ92753 470 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 MRPL48Q96GC5 212 aaKnown RBP16.66■□□□□ 0.26
PSPC1-203ENST00000471658 MED18Q9BUE0 208 aa16.66■□□□□ 0.26
PSPC1-203ENST00000471658 CRNNQ9UBG3 495 aaPredicted RBP16.66■□□□□ 0.26
PSPC1-203ENST00000471658 ADGRG4Q8IZF6 3080 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 PNMA8CA0A1B0GUJ8 204 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 M0R1B8 84 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 SRSF10O75494 262 aaKnown RBP16.65■□□□□ 0.26
PSPC1-203ENST00000471658 IGLV1-44P01699 117 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 TACSTD2P09758 323 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 CECR9P0C854 216 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 HSMCR30P0CW71 290 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 CX3CR1P49238 355 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 GBX2P52951 348 aaPredicted RBP16.65■□□□□ 0.26
PSPC1-203ENST00000471658 GRB2P62993 217 aaKnown RBP16.65■□□□□ 0.26
PSPC1-203ENST00000471658 ECH1Q13011 328 aa16.65■□□□□ 0.26
PSPC1-203ENST00000471658 UBE2UQ5VVX9 321 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms