RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MNTQ99583 582 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 COQ7Q99807 217 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TEX12Q9BXU0 123 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 HDHD5Q9BXW7 423 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ELOVL3Q9HB03 270 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 B3GAT2Q9NPZ5 323 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 INPP5EQ9NRR6 644 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ACOXLQ9NUZ1 547 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 FRRS1LQ9P0K9 344 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 H2AFY2Q9P0M6 372 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TPRKBQ9Y3C4 175 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 LRP12Q9Y561 859 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TIMM10BQ9Y5J6 103 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 HCFC1P51610 2035 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 OR4C45A6NMZ5 311 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 RGS10O43665 173 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SC5DO75845 299 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SULT1C4O75897 302 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 FADS2O95864 444 aaKnown RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 NGFP01138 241 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 NR2C1P13056 603 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 CCL2P13500 99 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 APEX1P27695 318 aaKnown RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 LIPAP38571 399 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 RPS7P62081 194 aaKnown RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 NKX6-1P78426 367 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SORDQ00796 357 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 TPBGQ13641 420 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 RAB35Q15286 201 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SNAI3Q3KNW1 292 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SYT6Q5T7P8 510 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 OR7E24Q6IFN5 339 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 CRIP3Q6Q6R5 217 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 ABHD12BQ7Z5M8 362 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 CATSPERDQ86XM0 798 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF679Q8IYX0 411 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 GJC3Q8NFK1 279 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 TSPAN14Q8NG11 270 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 OR10H4Q8NGA5 316 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 OR10AC1Q8NH08 325 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 OR1F12Q8NHA8 337 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 GATAD2BQ8WXI9 593 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 C4orf36Q96KX1 117 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 COG8Q96MW5 612 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 HS3ST6Q96QI5 342 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 ALG8Q9BVK2 526 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 C1QTNF6Q9BXI9 259 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 C1QTNF5Q9BXJ0 243 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 C1orf198Q9H425 327 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 SLC22A13Q9Y226 551 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 CAB39Q9Y376 341 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-207ENST00000471342 MYO18BQ8IUG5 2567 aa8.55□□□□□ -1.04
SF3A1-207ENST00000471342 IGHV2OR16-5A0A0B4J2B6 119 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 METTL15A6NJ78 407 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 SGCEO43556 437 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 TNFAIP8O95379 198 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 TTRP02766 147 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 RPSAP08865 295 aaKnown RBP8.54□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF823P16415 610 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 PSMB10P40306 273 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 MAGEB1P43366 347 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 MMP16P51512 607 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 GSG1Q2KHT4 349 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 WDR38Q5JTN6 314 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 MTFR2Q6P444 385 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 TMEM154Q6P9G4 183 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 KCTD8Q6ZWB6 473 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 SPATC1Q76KD6 591 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 P2RY8Q86VZ1 359 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 CCDC36Q8IYA8 594 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 PLPP7Q8NBV4 271 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 STEAP2Q8NFT2 490 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 THEM6Q8WUY1 208 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 ASB17Q8WXJ9 295 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 SPSB4Q96A44 273 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 YIPF6Q96EC8 236 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 C4orf45Q96LM5 186 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 KCNJ15Q99712 375 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 PPIL3Q9H2H8 161 aaKnown RBP8.54□□□□□ -1.04
SF3A1-207ENST00000471342 OBP2BQ9NPH6 170 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 BABAM2Q9NXR7 383 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
SF3A1-207ENST00000471342 EXOSC1Q9Y3B2 195 aaKnown RBP8.54□□□□□ -1.04
SF3A1-207ENST00000471342 CADP27708 2225 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 DAPL1A0PJW8 107 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 CIB4A0PJX0 185 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SHISA3A0PJX4 238 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SHISA9B4DS77 424 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 J3QKU1 62 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 PIN1P1O15428 100 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF254O75437 659 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 KRT33AO76009 404 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 UBL3O95164 117 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 PLAUP00749 431 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 SLC2A1P11166 492 aa8.53□□□□□ -1.04
SF3A1-207ENST00000471342 CD79AP11912 226 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms