RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ZFP3Q96NJ6 502 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 STACQ99469 402 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 PKMYT1Q99640 499 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 RBBP8Q99708 897 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM43Q9BTV4 400 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 RSG1Q9BU20 258 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 CWH43Q9H720 699 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 LIN28AQ9H9Z2 209 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 EXOSC4Q9NPD3 245 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SNX6Q9UNH7 406 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 MRPS7Q9Y2R9 242 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ATP6V0A2Q9Y487 856 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 MYO9AB2RTY4 2548 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TENM4Q6N022 2769 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 BSNQ9UPA5 3926 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 CFAP47Q6ZTR5 3102 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 LOXHD1Q8IVV2 1947 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ICE1Q9Y2F5 2266 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 RGS12O14924 1447 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 TTC28Q96AY4 2481 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CREBBPQ92793 2442 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 DYSFO75923 2080 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SETD1AO15047 1707 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 TPRP12270 2363 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 MAPK8IP3Q9UPT6 1336 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 IGLV1-36A0A0B4J1U3 117 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 IGHV3-72A0A0B4J1Y9 119 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 GLYATL1P3A0A0U1RQE8 302 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 A0A1W2PPE3 182 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 BTBD17A6NE02 478 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR6C70A6NIJ9 312 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CEACAM18A8MTB9 384 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CDC7O00311 574 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 NVLO15381 856 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF208O43345 1280 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 PEX11AO75192 247 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SNNO75324 88 aaPredicted RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 RDH16O75452 317 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CNMDO75829 334 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CLPXO76031 633 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 IGHV3-11P01762 117 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CRYGBP07316 175 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 HEXBP07686 556 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CD37P11049 281 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 ETS2P15036 469 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 RAB3AP20336 220 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 PSMB5P28074 263 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SSR1P43307 286 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 IDH2P48735 452 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 GZMMP51124 257 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SSR4P51571 173 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 P2RX1P51575 399 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 RND2P52198 227 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CDKN2DP55273 166 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SYNJ2BPP57105 145 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 BPIFB3P59826 476 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 KRTAP12-1P59990 96 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SEC61GP60059 68 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 POLR2FP61218 127 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 KCNJ2P63252 427 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 PRR3P79522 188 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SLC25A11Q02978 314 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 MAD2L1BPQ15013 274 aaPredicted RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 PDK3Q15120 406 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CDC37Q16543 378 aaPredicted RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CCDC152Q4G0S7 254 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 DEFB134Q4QY38 66 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 TCEAL5Q5H9L2 206 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 TEX30Q5JUR7 227 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 ADNP2Q6IQ32 1131 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 ANKRD26P1Q6NSI1 321 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SLC25A24Q6NUK1 477 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 MED27Q6P2C8 311 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CCDC73Q6ZRK6 1079 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 Q6ZS52 159 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 NT5DC3Q86UY8 548 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 ZSCAN30Q86W11 494 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 NKAIN4Q8IVV8 208 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 MS4A15Q8N5U1 240 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 COX18Q8N8Q8 333 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 Q8NDZ9 215 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 GMCL1P1Q8NEA9 526 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR5T1Q8NG75 326 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR4F6Q8NGB9 312 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR10AD1Q8NGE0 317 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR1S2Q8NGQ3 325 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 OR1L6Q8NGR2 347 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 LRRC29Q8WV35 223 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 UBE2Q2Q8WVN8 375 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 PIBF1Q8WXW3 757 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 HGDQ93099 445 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 TCEAL3Q969E4 200 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 DCPSQ96C86 337 aaKnown RBP0.47□□□□□ -2.33
UBXN4-207ENST00000471246 SEC22CQ9BRL7 303 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 CHCHD7Q9BUK0 85 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 GGTLC1Q9BX51 225 aa0.47□□□□□ -2.33
UBXN4-207ENST00000471246 EDA2RQ9HAV5 297 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms