RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TRBV4-1A0A0J9YWV2 114 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MYADML2A6NDP7 307 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 H3BNC9 293 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SOCS7O14512 581 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ARSAP15289 507 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SOX18P35713 384 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 LEXMQ3ZCV2 418 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PM20D1Q6GTS8 502 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 LETMD1Q6P1Q0 360 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CCDC190Q86UF4 302 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TTC9Q92623 222 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 FUBP1Q96AE4 644 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 GNPNAT1Q96EK6 184 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SIGLEC10Q96LC7 697 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ATP5SQ99766 215 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 B3GALT5Q9Y2C3 310 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SALL3Q9BXA9 1300 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KIR2DS1A0A191URI9 304 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RHBDL1O75783 438 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SLC5A2P31639 672 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KIR2DS4P43632 304 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CXCL12P48061 93 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 DCDP81605 110 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRDX4Q13162 271 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KIR2DS1Q14954 304 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SSX1Q16384 188 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MARCH3Q86UD3 253 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 C17orf78Q8N4C9 275 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR5AP2Q8NGF4 316 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR2D3Q8NGH3 330 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RLN3Q8WXF3 142 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CLEC4DQ8WXI8 215 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RTP4Q96DX8 246 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KAZALD1Q96I82 304 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SLC46A1Q96NT5 459 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TXNIPQ9H3M7 391 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 HINT3Q9NQE9 182 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 LYRM2Q9NU23 88 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NAT8BQ9UHF3 227 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PROCRQ9UNN8 238 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRRG2O14669 202 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CSN3P07498 182 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SRMP19623 302 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KCNJ10P78508 379 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 LSM11P83369 360 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF519Q8TB69 540 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RDH5Q92781 318 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NPY6RQ99463 290 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 C19orf43Q9BQ61 176 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ING1Q9UK53 422 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RCL1Q9Y2P8 373 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF324O75467 553 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-210ENST00000471181 OR2F2O95006 317 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 SLC10A3P09131 477 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 SUOXP51687 545 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM183BQ1AE95 376 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 FFAR4Q5NUL3 377 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF691Q5VV52 312 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 GPR26Q8NDV2 337 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 OR2I1PQ8NGU4 316 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 SLC25A32Q9H2D1 315 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 DLL4Q9NR61 685 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TAS2R4Q9NYW5 299 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 CNOT2Q9NZN8 540 aaKnown RBP6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TRAV20A0A0B4J274 112 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 BMP2P12643 396 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 CCR7P32248 378 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF841Q6ZN19 808 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 LRP11Q86VZ4 500 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM25Q86YD3 366 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 CMTM4Q8IZR5 234 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TCTEX1D1Q8N7M0 179 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 L3HYPDHQ96EM0 354 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 GRAMD2BQ96HH9 432 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 DDOQ99489 341 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ANKRD60Q9BZ19 345 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 IGSF5Q9NSI5 407 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ETV7Q9Y603 341 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 PLIN4Q96Q06 1357 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 PXDNQ92626 1479 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 C5orf49A4QMS7 147 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 OOEPA6NGQ2 149 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 M0R2Z0 102 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF354AO60765 605 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-210ENST00000471181 GASTP01350 101 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 CSF2RAP15509 400 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TNFRSF4P43489 277 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 GNG10P50151 68 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 UBE2MP61081 183 aaKnown RBP6.31□□□□□ -1.4
BRCA1-210ENST00000471181 TAZQ16635 292 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 RPEL1Q2QD12 228 aa6.31□□□□□ -1.4
BRCA1-210ENST00000471181 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms