RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ILKAPQ9H0C8 392 aaPredicted RBP2.53□□□□□ -2
SSB-209ENST00000470621 SAMSN1Q9NSI8 373 aaKnown RBP2.53□□□□□ -2
SSB-209ENST00000470621 HRASLS2Q9NWW9 162 aa2.53□□□□□ -2
SSB-209ENST00000470621 DHCR7Q9UBM7 475 aaKnown RBP2.53□□□□□ -2
SSB-209ENST00000470621 LGALS13Q9UHV8 139 aa2.53□□□□□ -2
SSB-209ENST00000470621 ZNF229Q9UJW7 825 aa2.53□□□□□ -2
SSB-209ENST00000470621 PALLDQ8WX93 1383 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 TRAV19A0A0A6YYK7 116 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 CENPVL3A0A0U1RRI6 287 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 GABRR3A8MPY1 467 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 SMKR1H3BMG3 65 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 POLR1CO15160 346 aaPredicted RBP2.52□□□□□ -2.01
SSB-209ENST00000470621 H6PDO95479 791 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 CD37P11049 281 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 ERGP11308 486 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 ATF6P18850 670 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 COL8A2P25067 703 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 U2AF2P26368 475 aaKnown RBP eCLIP2.52□□□□□ -2.015e-8■■□□□ 13.4
SSB-209ENST00000470621 SYNJ2BPP57105 145 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 VSX2P58304 361 aaPredicted RBP2.52□□□□□ -2.01
SSB-209ENST00000470621 ACTR3P61158 418 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 TCEAL5Q5H9L2 206 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 TTLQ8NG68 377 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 TCEAL3Q969E4 200 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 EEF1AKMT3Q96AZ1 226 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 GGTLC1Q9BX51 225 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 DHX35Q9H5Z1 703 aaKnown RBP2.52□□□□□ -2.01
SSB-209ENST00000470621 CBY1Q9Y3M2 126 aa2.52□□□□□ -2.01
SSB-209ENST00000470621 SEC16AO15027 2179 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 AKNAQ7Z591 1439 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 USP47Q96K76 1375 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 IGKV3D-11A0A0A0MRZ8 115 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 A0A1B0GW55 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 NCBP2LA6PVI3 153 aaKnown RBP2.51□□□□□ -2.01
SSB-209ENST00000470621 AIM2O14862 343 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 SLC22A5O76082 557 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4L2P0CJ85 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4L3P0CJ86 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4L5P0CJ88 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4L6P0CJ89 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4L7P0CJ90 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 IL1RNP18510 177 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 CD34P28906 385 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 CDH6P55285 790 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 GFERP55789 205 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 SP4Q02446 784 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 RBMY1FQ15415 496 aaKnown RBP2.51□□□□□ -2.01
SSB-209ENST00000470621 SSX2Q16385 188 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 UBE2UQ5VVX9 321 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 CERS6Q6ZMG9 384 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 AKR7LQ8NHP1 331 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 NUBPLQ8TB37 319 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 TMEM230Q96A57 120 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 DNAJC1Q96KC8 554 aaKnown RBP2.51□□□□□ -2.01
SSB-209ENST00000470621 SAMD10Q9BYL1 202 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 COX16Q9P0S2 106 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 UXTQ9UBK9 157 aaPredicted RBP2.51□□□□□ -2.01
SSB-209ENST00000470621 DUX4Q9UBX2 424 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 ENOPH1Q9UHY7 261 aa2.51□□□□□ -2.01
SSB-209ENST00000470621 IGHV3OR16-8A0A075B7F1 116 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 KIR2DS1A0A191URI9 304 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 KRBOX1C9JBD0 128 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 CLOCKO15516 846 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 OR2J3O76001 311 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 ARG1P05089 322 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 STXBP1P61764 594 aaKnown RBP2.5□□□□□ -2.01
SSB-209ENST00000470621 RPS23P62266 143 aaKnown RBP2.5□□□□□ -2.01
SSB-209ENST00000470621 RPL23P62829 140 aaKnown RBP2.5□□□□□ -2.01
SSB-209ENST00000470621 KIR2DS1Q14954 304 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 PPP1R7Q15435 360 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 CEP55Q53EZ4 464 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 SLC22A9Q8IVM8 553 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 CMTM1Q8IZ96 169 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 ZNF101Q8IZC7 436 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 IQCKQ8N0W5 287 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 CHST4Q8NCG5 386 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 OR52E2Q8NGJ4 325 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 OR1P1Q8NH06 330 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 SLC2A14Q8TDB8 520 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 DCPSQ96C86 337 aaKnown RBP2.5□□□□□ -2.01
SSB-209ENST00000470621 SDK2Q58EX2 2172 aa2.5□□□□□ -2.01
SSB-209ENST00000470621 NID2Q14112 1375 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 LYRM9A8MSI8 78 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 BTNL10A8MVZ5 291 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 NDUFC2-KCTD14E9PQ53 114 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 H7C1H1 209 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 PLPP1O14494 284 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 SEMA3DO95025 777 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 SERPINE2P07093 398 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ZNF24P17028 368 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 GDI2P50395 445 aaKnown RBP2.49□□□□□ -2.01
SSB-209ENST00000470621 CRISP1P54107 249 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 MEF2BQ02080 365 aaPredicted RBP2.49□□□□□ -2.01
SSB-209ENST00000470621 SELENBP1Q13228 472 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 IL15RAQ13261 267 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ADNP2Q6IQ32 1131 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 GUSBP11Q6P575 273 aa2.49□□□□□ -2.01
SSB-209ENST00000470621 ZNF547Q8IVP9 402 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms