RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DCLRE1CQ96SD1 692 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 ATF6BQ99941 703 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 YIPF3Q9GZM5 350 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 CDH20Q9HBT6 801 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 ADGRL4Q9HBW9 690 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 CA10Q9NS85 328 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 CISD1Q9NZ45 108 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 DNAJC27Q9NZQ0 273 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 HSPE1-MOB4S4R3N1 261 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 SNTNA6NMZ2 147 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 E7EQL1 145 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 J3QW42 95 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 CCL2P13500 99 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 RPS23P62266 143 aaKnown RBP12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 SETD9Q8NE22 299 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR10S1Q8NGN2 331 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 CYGBQ8WWM9 190 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 TFAP2CQ92754 450 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 NEUROG1Q92886 237 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 MNTQ99583 582 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 DHRS9Q9BPW9 319 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 FAIMQ9NVQ4 179 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 ATP23Q9Y6H3 246 aa12.89□□□□□ -0.35
CDC42SE1-203ENST00000470278 SMPD2O60906 423 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 ENTPD6O75354 484 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 LYNP07948 512 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 SBK2P0C263 348 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 DANCRP0C864 163 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 ALOX5APP20292 161 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 GLRXP35754 106 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 WNT5AP41221 380 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 NAA10P41227 235 aaPredicted RBP12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 RGS6P49758 472 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 NUDT6P53370 316 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 AQP4P55087 323 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 EIF2B1Q14232 305 aaKnown RBP12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 KRT80Q6KB66 452 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 ARL9Q6T311 187 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 USP51Q70EK9 711 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 DTX2Q86UW9 622 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 TMEM171Q8WVE6 324 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 IGFBPL1Q8WX77 278 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 Q96MT0 163 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 ABHD6Q9BV23 337 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 TBCCD1Q9NVR7 557 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
CDC42SE1-203ENST00000470278 JMJD1CQ15652 2540 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 H3BSA7 217 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 CCNOP22674 350 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 TUBG1P23258 451 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 TTKP33981 857 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 RAD52P43351 418 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 MTNR1AP48039 350 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 HSPA13P48723 471 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 UCP2P55851 309 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 SMAP2Q8WU79 429 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 NINJ1Q92982 152 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 EIF3KQ9UBQ5 218 aaKnown RBP12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 LAMP5Q9UJQ1 280 aa12.87□□□□□ -0.35
CDC42SE1-203ENST00000470278 PHYHO14832 338 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 GPRIN2O60269 458 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 CLIC3O95833 236 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ABHD16AO95870 558 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 RAF1P04049 648 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 GNAO1P09471 354 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 VHLP40337 213 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 OPRL1P41146 370 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 SLC15A1P46059 708 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ISL1P61371 349 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 GRB2P62993 217 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 IL5RAQ01344 420 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ROM1Q03395 351 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 EFNB3Q15768 340 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms