RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 OPN3Q9H1Y3 402 aaPredicted RBP7.12□□□□□ -1.27
NPHP3-204ENST00000469232 SLC17A5Q9NRA2 495 aa7.12□□□□□ -1.27
NPHP3-204ENST00000469232 ELOVL5Q9NYP7 299 aa7.12□□□□□ -1.27
NPHP3-204ENST00000469232 OSGIN2Q9Y236 505 aa7.12□□□□□ -1.27
NPHP3-204ENST00000469232 SIRT4Q9Y6E7 314 aaPredicted RBP7.12□□□□□ -1.27
NPHP3-204ENST00000469232 TRGV8A0A0C4DH27 118 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SMIM31A0A1B0GVY4 71 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 OR5H1A6NKK0 313 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 OR4C45A6NMZ5 311 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 E9PI62 339 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF701M0R085 212 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-204ENST00000469232 DVL2O14641 736 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 RER1O15258 196 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SC5DO75845 299 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 UBL3O95164 117 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 IGLV1-44P01699 117 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 IGLV3-1P01715 115 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 KRT8P05787 483 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF32P17041 273 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ARR3P36575 388 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 LIPAP38571 399 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 RGS6P49758 472 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 TLE1Q04724 770 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
NPHP3-204ENST00000469232 CDK5R1Q15078 307 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 NEDD8Q15843 81 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SLC25A35Q3KQZ1 300 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SLC36A2Q495M3 483 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ARMCX4Q5H9R4 360 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 MTFR2Q6P444 385 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 RPL22L1Q6P5R6 122 aaKnown RBP7.11□□□□□ -1.27
NPHP3-204ENST00000469232 CORO6Q6QEF8 472 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SEZ6L2Q6UXD5 910 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 LINC00346Q8IVM7 164 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 PHC2Q8IXK0 858 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 UBE2J2Q8N2K1 259 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 OR2AJ1Q8NGZ0 328 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 OR2G2Q8NGZ5 317 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 LILRB4Q8NHJ6 448 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 THEM6Q8WUY1 208 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SNX33Q8WV41 574 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ASB5Q8WWX0 329 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 HTRA1Q92743 480 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ITFG2Q969R8 447 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 TMIGD2Q96BF3 282 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 PGLYRP3Q96LB9 341 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 C4orf45Q96LM5 186 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 TBX5Q99593 518 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SH3GL3Q99963 347 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 BCL7BQ9BQE9 202 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 MROQ9BYG7 248 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ELOVL3Q9HB03 270 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 NOX3Q9HBY0 568 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 MOV10Q9HCE1 1003 aaKnown RBP7.11□□□□□ -1.27
NPHP3-204ENST00000469232 TRIM36Q9NQ86 728 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 ACOXLQ9NUZ1 547 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 NDUFB11Q9NX14 153 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 NDUFA13Q9P0J0 144 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 LRP12Q9Y561 859 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 NBASA2RRP1 2371 aa7.11□□□□□ -1.27
NPHP3-204ENST00000469232 SMG1Q96Q15 3661 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 DPPA5A6NC42 116 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 EIF4E1BA6NMX2 242 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 J3QLW9 94 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CCL21O00585 134 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 MAGEB4O15481 346 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 SGCEO43556 437 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 GPRIN2O60269 458 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 PNPP00491 289 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 IGKV3-15P01624 115 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CBR1P16152 277 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF19P17023 458 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CHRNB4P30926 498 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CCKARP32238 428 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 RIDAP52758 137 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 GBX2P52951 348 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 NANOS3P60323 173 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 GRB2P62993 217 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 TP53I3Q53FA7 332 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 ARSJQ5FYB0 599 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 TIMM23BQ5SRD1 257 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 LRRN1Q6UXK5 716 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 SLC16A12Q6ZSM3 486 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 NCCRP1Q6ZVX7 275 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 BHLHA15Q7RTS1 189 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 SLC16A14Q7RTX9 510 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CXorf67Q86X51 503 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CATSPERDQ86XM0 798 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 ANKRD13BQ86YJ7 626 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 ZNF584Q8IVC4 421 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CPEB3Q8NE35 698 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 OR1F12Q8NHA8 337 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 GATAD2BQ8WXI9 593 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 SMIM19Q96E16 107 aa7.1□□□□□ -1.27
NPHP3-204ENST00000469232 DCLRE1CQ96SD1 692 aaKnown RBP7.1□□□□□ -1.27
NPHP3-204ENST00000469232 CDADC1Q9BWV3 514 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms