RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 OR1F12Q8NHA8 337 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 MEGF10Q96KG7 1140 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 TMEM246Q9BRR3 403 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 SIKE1Q9BRV8 207 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 NSRP1Q9H0G5 558 aaKnown RBP10.24□□□□□ -0.77
COL5A1-207ENST00000469093 PRDM13Q9H4Q3 707 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 ASH2LQ9UBL3 628 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 MIOXQ9UGB7 285 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 MMP24Q9Y5R2 645 aa10.24□□□□□ -0.77
COL5A1-207ENST00000469093 TEX13CA0A0J9YWL9 993 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 IGHV3-64DA0A0J9YX35 117 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 LOC100653049A0A140TA62 436 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 MDFIC2A0A1B0GVS7 189 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 FAM220BPB1ANY3 271 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 XKRYO14609 159 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 MRASO14807 208 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 RER1O15258 196 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 KRT34O76011 436 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 FSTL3O95633 263 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 RPS2P15880 293 aaKnown RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 PMELP40967 661 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 LSM6P62312 80 aaKnown RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 GNB2P62879 340 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 SRSF4Q08170 494 aaKnown RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 ZBED5Q49AG3 693 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 FAM201AQ5SY85 155 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF730Q6ZMV8 503 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 TMPRSS11FQ6ZWK6 438 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 SPATC1Q76KD6 591 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 VTCN1Q7Z7D3 282 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 OR2T12Q8NG77 320 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 OR10AD1Q8NGE0 317 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 OR5L1Q8NGL2 311 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 LZICQ8WZA0 190 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 RASD2Q96D21 266 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 NEIL1Q96FI4 390 aaPredicted RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 PLEKHA8Q96JA3 519 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF582Q96NG8 517 aaPredicted RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 NMNAT1Q9HAN9 279 aaPredicted RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 PTTG3PQ9NZH4 202 aa10.23□□□□□ -0.77
COL5A1-207ENST00000469093 COA3Q9Y2R0 106 aaPredicted RBP10.23□□□□□ -0.77
COL5A1-207ENST00000469093 NOTCH1P46531 2555 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 ELOVL7A1L3X0 281 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 J3QW42 95 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 IMPA2O14732 288 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 MLNRO43193 412 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
COL5A1-207ENST00000469093 SLC16A7O60669 478 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 PTP4A3O75365 173 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 KHDRBS3O75525 346 aaKnown RBP10.22□□□□□ -0.77
COL5A1-207ENST00000469093 IFNW1P05000 195 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 GPR4P46093 362 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 SRP9P49458 86 aaKnown RBP10.22□□□□□ -0.77
COL5A1-207ENST00000469093 RGS6P49758 472 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 GNGT1P63211 74 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 KLF10Q13118 480 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 OCLNQ16625 522 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF181Q2M3W8 571 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 RSPO1Q2MKA7 263 aaPredicted RBP10.22□□□□□ -0.77
COL5A1-207ENST00000469093 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF404Q494X3 552 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 MIDNQ504T8 468 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 MBOAT2Q6ZWT7 520 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 MOGAT3Q86VF5 341 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 GLB1L2Q8IW92 636 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 OR10S1Q8NGN2 331 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 SLC30A2Q9BRI3 323 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 TMEM120AQ9BXJ8 343 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 SYT4Q9H2B2 425 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 RERGLQ9H628 205 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 CCDC134Q9H6E4 229 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 SAR1AQ9NR31 198 aa10.22□□□□□ -0.77
COL5A1-207ENST00000469093 BBIP1A8MTZ0 92 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 SRRM5B3KS81 715 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 F5H5P2 479 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 SELEP16581 610 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 KCNMB1Q16558 191 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 LYPD2Q6UXB3 125 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF841Q6ZN19 808 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 FITM2Q8N6M3 262 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 KIR3DL3Q8N743 410 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-207ENST00000469093 ZNF570Q96NI8 536 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 OR8B2Q96RD0 313 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 NUDT16L1Q9BRJ7 211 aaKnown RBP10.21□□□□□ -0.77
COL5A1-207ENST00000469093 CDADC1Q9BWV3 514 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 NUAK2Q9H093 628 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 NRIP3Q9NQ35 241 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 TMEM100Q9NV29 134 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 GID8Q9NWU2 228 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 CMTM6Q9NX76 183 aa10.21□□□□□ -0.77
COL5A1-207ENST00000469093 VSX1Q9NZR4 365 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-207ENST00000469093 PDP1Q9P0J1 537 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-207ENST00000469093 GMPR2Q9P2T1 348 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms