RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CADM1Q9BY67 442 aaKnown RBP9.53□□□□□ -0.88
COL4A6-205ENST00000468338 EGLN3Q9H6Z9 239 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 DYNLRB1Q9NP97 96 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 TBCCD1Q9NVR7 557 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 NKIRAS2Q9NYR9 191 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 ATPIF1Q9UII2 106 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 DUSP13Q9UII6 198 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 NDRG4Q9ULP0 352 aaKnown RBP9.53□□□□□ -0.88
COL4A6-205ENST00000468338 FZR1Q9UM11 496 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 U3KQV3 271 aa9.53□□□□□ -0.88
COL4A6-205ENST00000468338 SGCEO43556 437 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 TLX2O43763 284 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 RENP00797 406 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 NGFP01138 241 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 TFP02787 698 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 LCKP06239 509 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 ERCC1P07992 297 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 DAOP14920 347 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 GSTM3P21266 225 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 USF1P22415 310 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 TUBG1P23258 451 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 ALDH3B1P43353 468 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 SELENOVP59797 346 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 MRPS11P82912 194 aaKnown RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 COX10Q12887 443 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 MAD2L1BPQ15013 274 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 ELFN2Q5R3F8 820 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 OTPQ5XKR4 325 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 ZNF540Q8NDQ6 660 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 OR52E2Q8NGJ4 325 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 OR1J1Q8NGS3 322 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 C4orf45Q96LM5 186 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 Q96M66 194 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 PIMREGQ9BSJ6 248 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 OR51B6Q9H340 312 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 IFT22Q9H7X7 185 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 TUBG2Q9NRH3 451 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 SLCO1C1Q9NYB5 712 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 TAAR3PQ9P1P4 343 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 ASH2LQ9UBL3 628 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 EIF3KQ9UBQ5 218 aaKnown RBP9.52□□□□□ -0.89
COL4A6-205ENST00000468338 GPR160Q9UJ42 338 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 KLHL21Q9UJP4 597 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 LHFPL6Q9Y693 200 aa9.52□□□□□ -0.89
COL4A6-205ENST00000468338 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 RER1O15258 196 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 DOK2O60496 412 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 GPANK1O95872 356 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 CST1P01037 141 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 HPXP02790 462 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 TACSTD2P09758 323 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 CCNOP22674 350 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 GGT2P36268 569 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 MMP15P51511 669 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 GLO1Q04760 184 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 DBPQ10586 325 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 FLOT2Q14254 428 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 MOGQ16653 247 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 RSPO1Q2MKA7 263 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 KRTAP27-1Q3LI81 207 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 ZNF718Q3SXZ3 478 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 CLEC12AQ5QGZ9 265 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 TMEM179BQ7Z7N9 219 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 SDR9C7Q8NEX9 313 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 GJC3Q8NFK1 279 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 OR52L1Q8NGH7 329 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 OR4Q3Q8NH05 313 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 OR1F12Q8NHA8 337 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 SLC25A40Q8TBP6 338 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 KLF14Q8TD94 323 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 GIPC3Q8TF64 312 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 SLCO4A1Q96BD0 722 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 FEVQ99581 238 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 RBM4Q9BWF3 364 aaKnown RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 OR2J1Q9GZK6 312 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 BPESC1Q9GZL8 116 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 TPK1Q9H3S4 243 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 RERGLQ9H628 205 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 ELOVL3Q9HB03 270 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 HINT3Q9NQE9 182 aaKnown RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 RPRD1BQ9NQG5 326 aaKnown RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 MRPL22Q9NWU5 206 aaKnown RBP9.51□□□□□ -0.89
COL4A6-205ENST00000468338 PLEK2Q9NYT0 353 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 CYB5R1Q9UHQ9 305 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 BAIAP2Q9UQB8 552 aa9.51□□□□□ -0.89
COL4A6-205ENST00000468338 IGHV4-61A0A0C4DH41 118 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 A0A1W2PPW3 197 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 INAFM1C9JVW0 142 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 FKBP6O75344 327 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 RP2O75695 350 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 ATP5HO75947 161 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 NCR1O76036 304 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 ADH4P08319 380 aa9.5□□□□□ -0.89
COL4A6-205ENST00000468338 COL8A2P25067 703 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms