RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 KLHL41O60662 606 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 SLC22A5O76082 557 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 H6PDO95479 791 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 CD37P11049 281 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 FOXN2P32314 431 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 RBX1P62877 108 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 CCNA1P78396 465 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 TAF9Q16594 264 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 MBOAT1Q6ZNC8 495 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 TMEM150AQ86TG1 271 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 TBC1D21Q8IYX1 336 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 DNAJC1Q96KC8 554 aaKnown RBP1.88□□□□□ -2.11
SMC4-207ENST00000467263 GGTLC1Q9BX51 225 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 OR51M1Q9H341 326 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 MTFP1Q9UDX5 166 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 UBIAD1Q9Y5Z9 338 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 ADGRL1O94910 1474 aa1.88□□□□□ -2.11
SMC4-207ENST00000467263 DHX57Q6P158 1386 aaKnown RBP1.87□□□□□ -2.11
SMC4-207ENST00000467263 PALLDQ8WX93 1383 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 TMEM120BA0PK00 339 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 SMCO2A6NFE2 343 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 GABRR3A8MPY1 467 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 FKBP6O75344 327 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 P0C880 135 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 ERGP11308 486 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 U2AF2P26368 475 aaKnown RBP eCLIP1.87□□□□□ -2.113e-7■■■■■ 36
SMC4-207ENST00000467263 NAA10P41227 235 aaPredicted RBP1.87□□□□□ -2.11
SMC4-207ENST00000467263 SYNJ2BPP57105 145 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 FUT5Q11128 374 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 BAMBIQ13145 260 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 SOHLH1Q5JUK2 328 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 PPM1LQ5SGD2 360 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 ADNP2Q6IQ32 1131 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 OR9K2Q8NGE7 335 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 OR5M1Q8NGP8 315 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 EEF1AKMT3Q96AZ1 226 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 RSG1Q9BU20 258 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 EXOSC4Q9NPD3 245 aaKnown RBP1.87□□□□□ -2.11
SMC4-207ENST00000467263 SLC2A8Q9NY64 477 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 C21orf62Q9NYP8 219 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 ZNF391Q9UJN7 358 aa1.87□□□□□ -2.11
SMC4-207ENST00000467263 IGKV1-8A0A0C4DH67 115 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 C16orf90A8MZG2 172 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 AIM2O14862 343 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 SEMA3DO95025 777 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 SLC2A3P11169 496 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 STXBP1P61764 594 aaKnown RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 RPL23P62829 140 aaKnown RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 PRR3P79522 188 aaKnown RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 FLI1Q01543 452 aaPredicted RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 TMEM107Q6UX40 140 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 NPWQ8N729 165 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 SPANXA2-OT1Q8N9U9 137 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 CHST4Q8NCG5 386 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 APCDD1LQ8NCL9 501 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 FBXO32Q969P5 355 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 TMEM230Q96A57 120 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 DCPSQ96C86 337 aaKnown RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 CDX2Q99626 313 aaPredicted RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 FRMD8P1Q9BZ68 369 aaPredicted RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 PLA2G12AQ9BZM1 189 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 HRASLS2Q9NWW9 162 aa1.86□□□□□ -2.11
SMC4-207ENST00000467263 UXTQ9UBK9 157 aaPredicted RBP1.86□□□□□ -2.11
SMC4-207ENST00000467263 USP47Q96K76 1375 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 KRBOX1C9JBD0 128 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 SMKR1H3BMG3 65 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 TAGLN2P37802 199 aaKnown RBP1.85□□□□□ -2.11
SMC4-207ENST00000467263 ACLYP53396 1101 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 CDH6P55285 790 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 GFERP55789 205 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 RPS23P62266 143 aaKnown RBP1.85□□□□□ -2.11
SMC4-207ENST00000467263 RPS11P62280 158 aaKnown RBP eCLIP1.85□□□□□ -2.11
SMC4-207ENST00000467263 RBMY1FQ15415 496 aaKnown RBP1.85□□□□□ -2.11
SMC4-207ENST00000467263 GUSBP11Q6P575 273 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 CASP12Q6UXS9 341 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
SMC4-207ENST00000467263 ZNF101Q8IZC7 436 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 CSGALNACT2Q8N6G5 542 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 NECAB1Q8N987 351 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 C11orf72Q8NBR9 251 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 C1orf64Q8NEQ6 169 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 OR11H7Q8NGC8 314 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 KCNG3Q8TAE7 436 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 WDR34Q96EX3 536 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 ANGPTL4Q9BY76 406 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 METTL7AQ9H8H3 244 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 LGALS13Q9UHV8 139 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 ZNF230Q9UIE0 474 aaPredicted RBP1.85□□□□□ -2.11
SMC4-207ENST00000467263 TICRRQ7Z2Z1 1910 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 ZNF407Q9C0G0 2248 aa1.85□□□□□ -2.11
SMC4-207ENST00000467263 NLRC5Q86WI3 1866 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 OR5H1A6NKK0 313 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 LYRM9A8MSI8 78 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 CPLX1O14810 134 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 CDC40O60508 579 aaKnown RBP eCLIP1.84□□□□□ -2.11
SMC4-207ENST00000467263 EIF1BO60739 113 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms