RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 RHOJQ9H4E5 214 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 COQ10BQ9H8M1 238 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 UGT1A7Q9HAW7 530 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 UGT1A10Q9HAW8 530 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 UGT1A8Q9HAW9 530 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 IL26Q9NPH9 171 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PARVAQ9NVD7 372 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ETNK2Q9NVF9 386 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 EURLQ9NYK6 297 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 EHFQ9NZC4 300 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 ZNF282Q9UDV7 671 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 RWDD2AQ9UIY3 292 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 GNPTGQ9UJJ9 305 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 C3orf18Q9UK00 162 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 B9D1Q9UPM9 204 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 PDE10AQ9Y233 779 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 L3MBTL1Q9Y468 752 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 CCDC168Q8NDH2 2452 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 SPG11Q96JI7 2443 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 NSD1Q96L73 2696 aaPredicted RBP2.2□□□□□ -2.06
XRN1-206ENST00000467077 POLEQ07864 2286 aa2.2□□□□□ -2.06
XRN1-206ENST00000467077 CR1P17927 2039 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 A0A0J9YY10 115 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 GLYATL1P3A0A0U1RQE8 302 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 SAGE2PA6NJ88 616 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 VSTM2BA6NLU5 285 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 EMC8O43402 210 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 MFSD11O43934 449 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ANP32DO95626 131 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CCDC166P0CW27 439 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 RALBP11234 206 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 NR2C1P13056 603 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 H2AFXP16104 143 aaPredicted RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 TNNI3P19429 210 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 MAGP20916 626 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CCNCP24863 283 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 RFC3P40938 356 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 SSR1P43307 286 aaKnown RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 OR3A4PP47883 348 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 NUP107P57740 925 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 VSX2P58304 361 aaPredicted RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 RPL8P62917 257 aaKnown RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 PSG7Q13046 419 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ZNF154Q13106 437 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 DPYSL3Q14195 570 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 KCNJ11Q14654 390 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 LINC01620Q4KN68 170 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 FILIP1LQ4L180 1135 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 FAM120AOSQ5T036 256 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 DCST2Q5T1A1 773 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 GPRC6AQ5T6X5 926 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ASPHD2Q6ICH7 369 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 UFSP1Q6NVU6 142 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 AFTPHQ6ULP2 937 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CBLN3Q6UW01 205 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 KDELC1Q6UW63 502 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 LANCL3Q6ZV70 420 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 LRRC70Q7Z2Q7 622 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 IFNEQ86WN2 208 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CRLF3Q8IUI8 442 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CADM2Q8N3J6 435 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 RPRMLQ8N4K4 120 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 TTC29Q8NA56 475 aaPredicted RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 MDS2Q8NDY4 140 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 OR5AR1Q8NGP9 310 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 SLC25A38Q96DW6 304 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 DCUN1D1Q96GG9 259 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 TRIB3Q96RU7 358 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 SECISBP2Q96T21 854 aaKnown RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 ZNF184Q99676 751 aaPredicted RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 TSSK1BQ9BXA7 367 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 KRTAP4-1Q9BYQ7 146 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CHRNA10Q9GZZ6 450 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 DEFB127Q9H1M4 99 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 WDR76Q9H967 626 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 COG4Q9H9E3 785 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 CALHM2Q9HA72 323 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 RDH8Q9NYR8 311 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 STOX2Q9P2F5 926 aaPredicted RBP2.19□□□□□ -2.06
XRN1-206ENST00000467077 GALPQ9UBC7 116 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ASF1AQ9Y294 204 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ATP6V1DQ9Y5K8 247 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ALG6Q9Y672 507 aa2.19□□□□□ -2.06
XRN1-206ENST00000467077 ZANQ9Y493 2812 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 MTORP42345 2549 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 HEATR5BQ9P2D3 2071 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 TUBAL3A6NHL2 446 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 GABRR3A8MPY1 467 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 E9PLD3 99 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 KLRC4-KLRK1H3BQV0 150 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 KCNK1O00180 336 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 DNAJB6O75190 326 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 TRIM3O75382 744 aaPredicted RBP2.18□□□□□ -2.06
XRN1-206ENST00000467077 STX11O75558 287 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 SRP72O76094 671 aaKnown RBP2.18□□□□□ -2.06
XRN1-206ENST00000467077 ANXA5P08758 320 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 CALCBP10092 127 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 BCKDHAP12694 445 aa2.18□□□□□ -2.06
XRN1-206ENST00000467077 PEBP1P30086 187 aaKnown RBP2.18□□□□□ -2.06
XRN1-206ENST00000467077 PCK1P35558 622 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms