RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ABHD12BQ7Z5M8 362 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 METTL13Q8N6R0 699 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 FAM184AQ8NB25 1140 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR56A4Q8NGH8 313 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 GPX8Q8TED1 209 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 APH1BQ8WW43 257 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 NDFIP1Q9BT67 221 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 CALN1Q9BXU9 219 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4Q9UBX2 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF282Q9UDV7 671 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 UBN2Q6ZU65 1347 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PHLPP2Q6ZVD8 1323 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 TMEM120BA0PK00 339 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 TEX46H3BTG2 121 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLC9A3R1O14745 358 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 BCKDKO14874 412 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 SEMA3DO95025 777 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 YIF1AO95070 293 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 IFNW1P05000 195 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF823P16415 610 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLC1A2P43004 574 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPS9P46781 194 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PFN3P60673 137 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PPP1CBP62140 327 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PRR3P79522 188 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ART3Q13508 389 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 C16orf72Q14CZ0 275 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 AVPI1Q5T686 147 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZFP2Q6ZN57 461 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 NCCRP1Q6ZVX7 275 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZFP41Q8N8Y5 198 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR52E5Q8NH55 327 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ISG20Q96AZ6 181 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 DCPSQ96C86 337 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 NRBF2Q96F24 287 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 GPR21Q99679 349 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLC7A5P2Q9GIP4 190 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PXMP2Q9NR77 195 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 AGPAT4Q9NRZ5 378 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNRD1Q9P1U0 126 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 MYEF2Q9P2K5 600 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 PSG11Q9UQ72 335 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 HYOU1Q9Y4L1 999 aa2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 GPATCH8Q9UKJ3 1502 aaKnown RBP2.71□□□□□ -1.98
CDC42BPA-211ENST00000466538 GAKO14976 1311 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 NACAE9PAV3 2078 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGKV6D-21A0A0A0MT36 114 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 NCBP2LA6PVI3 153 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 K7EMT4 169 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 BET1O15155 118 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 AKR7A2O43488 359 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 XRCC2O43543 280 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 EIF4EP06730 217 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 CISD3P0C7P0 127 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 RAB4AP20338 218 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 MSR1P21757 451 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 DTYMKP23919 212 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 SSTR5P35346 364 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 RFC3P40938 356 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 RAB11AP62491 216 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 IRF8Q02556 426 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 DNAJC3Q13217 504 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 RAB11BQ15907 218 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TRMT5Q32P41 509 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TFDP3Q5H9I0 405 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TCEAL5Q5H9L2 206 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF691Q5VV52 312 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM71E1Q6IPT2 247 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 CEMP1Q6PRD7 247 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 BHLHA15Q7RTS1 189 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM71AQ8IYT1 594 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 CYB561D1Q8N8Q1 229 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR10AD1Q8NGE0 317 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 UBALD1Q8TB05 177 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 PIFOQ8TCI5 191 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 C15orf40Q8WUR7 153 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF75CPQ92670 426 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TCEAL3Q969E4 200 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 BTN2A3PQ96KV6 586 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 COL21A1Q96P44 957 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TIMM17AQ99595 171 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 BLZF1Q9H2G9 400 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 SPNS1Q9H2V7 528 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 BEX1Q9HBH7 125 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 ACP6Q9NPH0 428 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 MED4Q9NPJ6 270 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZC4H2Q9NQZ6 224 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 CHRAC1Q9NRG0 131 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TMEM14AQ9Y6G1 99 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 TMEM94Q12767 1356 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 PALLDQ8WX93 1383 aa2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 EIF4G1Q04637 1599 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-211ENST00000466538 PIKFYVEQ9Y2I7 2098 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGKV2D-24A0A075B6R9 120 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM25EA8MYX2 175 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 TRDMT1O14717 391 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 RDH16O75452 317 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 CTDNEP1O95476 244 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 TACSTD2P09758 323 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 POLR2MP0CAP2 368 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms